Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:80427682-83947781

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77 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm5940 X 80456742 to 80457809 1067 + pseudogene predicted gene 5940
Gm8806 X 80533745 to 80535151 1406 - pseudogene predicted gene 8806
Gm6954 X 80666313 to 80666537 224 + pseudogene predicted pseudogene 6954
Gm14733 X 80932816 to 80932948 132 - pseudogene predicted gene 14733
Tssr161382 X 81021186 to 81021187 1 + TSS region transcription start site region 161382
Cpgi22815 X 81070466 to 81071326 860 CpG island CpG island 22815
Tssr161383 X 81070637 to 81070644 7 + TSS region transcription start site region 161383
Tssr161384 X 81070646 to 81070740 94 + TSS region transcription start site region 161384
Gm26775 X 81070694 to 81073102 2408 - lincRNA gene predicted gene, 26775
Tmem47 X 81070698 to 81097872 27174 + protein coding gene transmembrane protein 47
Tssr161385 X 81070742 to 81070753 11 + TSS region transcription start site region 161385
Tssr161386 X 81094534 to 81094547 13 + TSS region transcription start site region 161386
Tssr161387 X 81094552 to 81094565 13 + TSS region transcription start site region 161387
Tssr161388 X 81094572 to 81094591 19 + TSS region transcription start site region 161388
DXMit112 X 81094582 to 81094781 199 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 112
Tssr161389 X 81094592 to 81094610 18 + TSS region transcription start site region 161389
DXMit111 X 81094630 to 81094825 195 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 111
Gm14754 X 81271770 to 81272495 725 - pseudogene predicted gene 14754
Gm18497 X 81297851 to 81298382 531 - pseudogene predicted gene, 18497
4930595M18Rik X 81419575 to 81458121 38546 - protein coding gene RIKEN cDNA 4930595M18 gene
Gm8822 X 81820384 to 81822730 2346 - pseudogene predicted gene 8822
Tssr163726 X 81821575 to 81821591 16 - TSS region transcription start site region 163726
Tssr163727 X 81822766 to 81822815 49 - TSS region transcription start site region 163727
Tssr163728 X 81822876 to 81822890 14 - TSS region transcription start site region 163728
DXMit228 X 81953919 to 81954043 124 DNA segment DNA Segment, Chr X, Massachusetts Institute of Technology 228
Gm26174 X 82178454 to 82178672 218 + ribozyme gene predicted gene, 26174
Gm22686 X 82187682 to 82187781 99 + snRNA gene predicted gene, 22686
Gm18386 X 82306961 to 82307647 686 - pseudogene predicted gene, 18386
Tssr161390 X 82310962 to 82310973 11 + TSS region transcription start site region 161390
Tssr161391 X 82327259 to 82327261 2 + TSS region transcription start site region 161391
Rpl10-ps4 X 82400724 to 82401009 285 - pseudogene ribosomal protein L10, pseudogene 4
Gm24706 X 82401091 to 82401227 136 - snoRNA gene predicted gene, 24706
Gm14740 X 82441600 to 82442749 1149 + pseudogene predicted gene 14740
Tssr161392 X 82513208 to 82513213 5 + TSS region transcription start site region 161392
Gm14739 X 82687021 to 82687822 801 - pseudogene predicted gene 14739
Gm24470 X 82692239 to 82692370 131 - snoRNA gene predicted gene, 24470
Gm14741 X 82757852 to 82758430 578 - pseudogene predicted gene 14741
Tssr161393 X 82814745 to 82814758 13 + TSS region transcription start site region 161393
Tssr161394 X 82814886 to 82814920 34 + TSS region transcription start site region 161394
Gm23671 X 82897397 to 82897499 102 - unclassified non-coding RNA gene predicted gene, 23671
Tssr161395 X 82948861 to 82948915 54 + TSS region transcription start site region 161395
Dmd X 82948870 to 85206141 2257271 + protein coding gene dystrophin, muscular dystrophy
exma X 82948870 to 94123702 11174832 heritable phenotypic marker exencephaly and severe microphthalmia/anophthalmia
Tssr161396 X 82948992 to 82949023 31 + TSS region transcription start site region 161396
Tssr161397 X 82949079 to 82949090 11 + TSS region transcription start site region 161397
Tssr161398 X 82950534 to 82950538 4 + TSS region transcription start site region 161398
Tssr161399 X 82954202 to 82954204 2 + TSS region transcription start site region 161399
Tssr161400 X 82960562 to 82960591 29 + TSS region transcription start site region 161400
Tssr161401 X 83043101 to 83043125 24 + TSS region transcription start site region 161401
Tssr161402 X 83043219 to 83043226 7 + TSS region transcription start site region 161402
Tssr161403 X 83043228 to 83043240 12 + TSS region transcription start site region 161403
Tssr161404 X 83043292 to 83043306 14 + TSS region transcription start site region 161404
Tssr161405 X 83043404 to 83043425 21 + TSS region transcription start site region 161405
Tssr161406 X 83043426 to 83043431 5 + TSS region transcription start site region 161406
Tssr161407 X 83043455 to 83043458 3 + TSS region transcription start site region 161407
Tssr161408 X 83069406 to 83069409 3 + TSS region transcription start site region 161408
Tssr161409 X 83082410 to 83082416 6 + TSS region transcription start site region 161409
Tssr161410 X 83087799 to 83087800 1 + TSS region transcription start site region 161410
Tssr161411 X 83116795 to 83116806 11 + TSS region transcription start site region 161411
Tssr161412 X 83222543 to 83222547 4 + TSS region transcription start site region 161412
n-R5s9 X 83345743 to 83345859 116 + rRNA gene nuclear encoded rRNA 5S 9
Tssr161413 X 83376351 to 83376353 2 + TSS region transcription start site region 161413
Tsga8 X 83486678 to 83487924 1246 - protein coding gene testis specific gene A8
Tssr163729 X 83487780 to 83487791 11 - TSS region transcription start site region 163729
Gm22580 X 83536031 to 83536137 106 + snRNA gene predicted gene, 22580
Tssr161414 X 83583003 to 83583015 12 + TSS region transcription start site region 161414
Tssr161415 X 83588483 to 83588498 15 + TSS region transcription start site region 161415
Tssr5643 X 83589621 to 83589627 6 + TSS region transcription start site region 5643
Tssr161416 X 83591937 to 83591943 6 + TSS region transcription start site region 161416
Tssr161417 X 83592131 to 83592137 6 + TSS region transcription start site region 161417
Tssr161418 X 83593891 to 83593896 5 + TSS region transcription start site region 161418
Tssr163730 X 83772601 to 83772618 17 - TSS region transcription start site region 163730
Tssr5644 X 83779841 to 83779848 7 + TSS region transcription start site region 5644
Gm18847 X 83795293 to 83796194 901 - pseudogene predicted gene, 18847
Tssr161419 X 83855367 to 83855370 3 + TSS region transcription start site region 161419
Tssr161420 X 83855382 to 83855399 17 + TSS region transcription start site region 161420
Gm46696 X 83872971 to 83879616 6645 - pseudogene predicted gene, 46696