Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:7930932-8080949

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hdac6 X 7930120 to 7947889 17769 - protein coding gene histone deacetylase 6
DXImx16 X 7934813 to 7934997 184 DNA segment DNA segment, Chr X, Immunex 16
DXImx17 X 7935396 to 7935543 147 DNA segment DNA segment, Chr X, Immunex 17
Cpgi22588 X 7947591 to 7948424 833 CpG island CpG island 22588
Tssr162826 X 7947664 to 7947674 10 - TSS region transcription start site region 162826
Tssr162827 X 7947743 to 7947751 8 - TSS region transcription start site region 162827
Tssr162828 X 7947763 to 7947776 13 - TSS region transcription start site region 162828
Tssr162829 X 7947779 to 7947815 36 - TSS region transcription start site region 162829
Tssr162830 X 7947819 to 7947832 13 - TSS region transcription start site region 162830
Tssr162831 X 7947848 to 7947857 9 - TSS region transcription start site region 162831
Gm39488 X 7948101 to 8033483 85382 + lncRNA gene predicted gene, 39488
Psmb6-ps X 7950156 to 7950868 712 - pseudogene proteasome (prosome, macropain) subunit, beta type 6, pseudogene
Gata1 X 7959260 to 7976682 17422 - protein coding gene GATA binding protein 1
Tssr162832 X 7964166 to 7964191 25 - TSS region transcription start site region 162832
Tssr160483 X 7966340 to 7966366 26 + TSS region transcription start site region 160483
Tssr162833 X 7967802 to 7967812 10 - TSS region transcription start site region 162833
Tssr162834 X 7967817 to 7967875 58 - TSS region transcription start site region 162834
Tssr162835 X 7976544 to 7976562 18 - TSS region transcription start site region 162835
Tssr162836 X 7976588 to 7976607 19 - TSS region transcription start site region 162836
Tssr162837 X 7977968 to 7977975 7 - TSS region transcription start site region 162837
Tssr162838 X 7978027 to 7978040 13 - TSS region transcription start site region 162838
Glod5 X 8004201 to 8018492 14291 - protein coding gene glyoxalase domain containing 5
Tssr162839 X 8005932 to 8005949 17 - TSS region transcription start site region 162839
Tssr162840 X 8005956 to 8005981 25 - TSS region transcription start site region 162840
Tssr162841 X 8015568 to 8015581 13 - TSS region transcription start site region 162841
Tssr162842 X 8015811 to 8015839 28 - TSS region transcription start site region 162842
Tssr162843 X 8018449 to 8018490 41 - TSS region transcription start site region 162843
Tssr162844 X 8018493 to 8018502 9 - TSS region transcription start site region 162844
Gm9429 X 8034212 to 8035079 867 + pseudogene predicted gene 9429
Rpl22-ps1 X 8038611 to 8038996 385 - pseudogene ribosomal protein L22, pseudogene 1
Tssr162845 X 8039005 to 8039019 14 - TSS region transcription start site region 162845
Gm14799 X 8042465 to 8042893 428 - pseudogene predicted gene 14799
Gm14820 X 8042943 to 8074619 31676 + antisense lncRNA gene predicted gene 14820
Tssr160484 X 8046591 to 8046593 2 + TSS region transcription start site region 160484
Tssr160485 X 8047188 to 8047205 17 + TSS region transcription start site region 160485
Gm7079 X 8047229 to 8047399 170 + pseudogene predicted pseudogene 7079
Tssr160486 X 8049229 to 8049241 12 + TSS region transcription start site region 160486
Tssr160487 X 8050742 to 8050787 45 + TSS region transcription start site region 160487
Tssr160488 X 8051582 to 8051603 21 + TSS region transcription start site region 160488
Suv39h1 X 8061171 to 8074760 13589 - protein coding gene suppressor of variegation 3-9 1
Cpgi22589 X 8073869 to 8074847 978 CpG island CpG island 22589
Tssr162846 X 8074570 to 8074626 56 - TSS region transcription start site region 162846
Tssr162847 X 8074720 to 8074736 16 - TSS region transcription start site region 162847