Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:78723455-81113484

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53 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr161377 X 78737737 to 78737757 20 + TSS region transcription start site region 161377
Fam47c X 78737763 to 78739401 1638 + protein coding gene family with sequence similarity 47, member C
Tssr161378 X 78737774 to 78737783 9 + TSS region transcription start site region 161378
Tssr161379 X 78737795 to 78737802 7 + TSS region transcription start site region 161379
Gm8770 X 78785747 to 78786855 1108 + pseudogene predicted gene 8770
Gm5939 X 78855408 to 78858281 2873 - pseudogene predicted pseudogene 5939
Cpgi22813 X 78856864 to 78857024 160 CpG island CpG island 22813
Cypt13 X 78861771 to 78862276 505 unclassified gene cysteine-rich perinuclear theca 13
Gm23556 X 78908549 to 78908640 91 - miRNA gene predicted gene, 23556
Tssr161380 X 78954017 to 78954020 3 + TSS region transcription start site region 161380
Gm14751 X 79008747 to 79008968 221 - pseudogene predicted gene 14751
Gm17902 X 79186106 to 79186617 511 + pseudogene predicted gene, 17902
Rps24-ps3 X 79195047 to 79195448 401 + pseudogene ribosomal protein S24, pseudogene 3
Cfap47 X 79266559 to 79517285 250726 - unclassified gene cilia and flagella associated protein 47
DXMit77 X 79365542 to 79365662 120 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 77
Cpgi22814 X 79517312 to 79517507 195 CpG island CpG island 22814
Tssr163717 X 79517333 to 79517376 43 - TSS region transcription start site region 163717
DXMit44 X 79576419 to 79576600 181 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 44
Gm17817 X 79616703 to 79617599 896 + pseudogene predicted gene, 17817
Mageb16 X 79623231 to 79671435 48204 - protein coding gene melanoma antigen family B, 16
Gm8792 X 79631165 to 79631874 709 - pseudogene predicted gene 8792
Tssr163718 X 79631174 to 79631199 25 - TSS region transcription start site region 163718
Tssr163719 X 79635547 to 79635558 11 - TSS region transcription start site region 163719
Tssr163720 X 79635575 to 79635587 12 - TSS region transcription start site region 163720
Tssr163721 X 79643593 to 79643614 21 - TSS region transcription start site region 163721
Tssr163722 X 79671434 to 79671438 4 - TSS region transcription start site region 163722
Tssr163723 X 79671522 to 79671546 24 - TSS region transcription start site region 163723
Gm4772 X 79902724 to 79903566 842 - pseudogene predicted gene 4772
Tssr161381 X 79904358 to 79904363 5 + TSS region transcription start site region 161381
Tssr163724 X 79918455 to 79918484 29 - TSS region transcription start site region 163724
Gm4773 X 80061011 to 80061712 701 - pseudogene predicted gene 4773
Gm18107 X 80167983 to 80168492 509 - pseudogene predicted gene, 18107
Gm14760 X 80193854 to 80194852 998 - pseudogene predicted gene 14760
Gm6952 X 80197081 to 80197239 158 - pseudogene predicted gene 6952
Tssr163725 X 80197275 to 80197280 5 - TSS region transcription start site region 163725
Gm14768 X 80362549 to 80363233 684 + pseudogene predicted gene 14768
Gm5940 X 80456742 to 80457809 1067 + pseudogene predicted gene 5940
Gm8806 X 80533745 to 80535151 1406 - pseudogene predicted gene 8806
Gm6954 X 80666313 to 80666537 224 + pseudogene predicted pseudogene 6954
Gm14733 X 80932816 to 80932948 132 - pseudogene predicted gene 14733
Tssr161382 X 81021186 to 81021187 1 + TSS region transcription start site region 161382
Cpgi22815 X 81070466 to 81071326 860 CpG island CpG island 22815
Tssr161383 X 81070637 to 81070644 7 + TSS region transcription start site region 161383
Tssr161384 X 81070646 to 81070740 94 + TSS region transcription start site region 161384
Gm26775 X 81070694 to 81073102 2408 - lincRNA gene predicted gene, 26775
Tmem47 X 81070698 to 81097872 27174 + protein coding gene transmembrane protein 47
Tssr161385 X 81070742 to 81070753 11 + TSS region transcription start site region 161385
Tssr161386 X 81094534 to 81094547 13 + TSS region transcription start site region 161386
Tssr161387 X 81094552 to 81094565 13 + TSS region transcription start site region 161387
Tssr161388 X 81094572 to 81094591 19 + TSS region transcription start site region 161388
DXMit112 X 81094582 to 81094781 199 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 112
Tssr161389 X 81094592 to 81094610 18 + TSS region transcription start site region 161389
DXMit111 X 81094630 to 81094825 195 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 111