Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:78571106-79801617

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Prrg1 X 78449613 to 78583896 134283 - protein coding gene proline rich Gla (G-carboxyglutamic acid) 1
B930042K01Rik X 78574533 to 78577524 2991 unclassified gene RIKEN cDNA B930042K01 gene
Cpgi22812 X 78583636 to 78583839 203 CpG island CpG island 22812
Tssr163712 X 78583783 to 78583796 13 - TSS region transcription start site region 163712
Tssr163713 X 78583799 to 78583810 11 - TSS region transcription start site region 163713
Tssr163714 X 78583814 to 78583821 7 - TSS region transcription start site region 163714
Tssr163715 X 78583850 to 78583859 9 - TSS region transcription start site region 163715
Tssr163716 X 78583882 to 78583901 19 - TSS region transcription start site region 163716
Gm8757 X 78624706 to 78625077 371 + pseudogene predicted gene 8757
Gm8761 X 78655788 to 78656739 951 - pseudogene predicted gene 8761
Gm14747 X 78682205 to 78683188 983 - pseudogene predicted gene 14747
Tssr161377 X 78737737 to 78737757 20 + TSS region transcription start site region 161377
Fam47c X 78737763 to 78739401 1638 + protein coding gene family with sequence similarity 47, member C
Tssr161378 X 78737774 to 78737783 9 + TSS region transcription start site region 161378
Tssr161379 X 78737795 to 78737802 7 + TSS region transcription start site region 161379
Gm8770 X 78785747 to 78786855 1108 + pseudogene predicted gene 8770
Gm5939 X 78855408 to 78858281 2873 - pseudogene predicted pseudogene 5939
Cpgi22813 X 78856864 to 78857024 160 CpG island CpG island 22813
Cypt13 X 78861771 to 78862276 505 unclassified gene cysteine-rich perinuclear theca 13
Gm23556 X 78908549 to 78908640 91 - miRNA gene predicted gene, 23556
Tssr161380 X 78954017 to 78954020 3 + TSS region transcription start site region 161380
Gm14751 X 79008747 to 79008968 221 - pseudogene predicted gene 14751
Gm17902 X 79186106 to 79186617 511 + pseudogene predicted gene, 17902
Rps24-ps3 X 79195047 to 79195448 401 + pseudogene ribosomal protein S24, pseudogene 3
Cfap47 X 79266559 to 79517285 250726 - unclassified gene cilia and flagella associated protein 47
DXMit77 X 79365542 to 79365662 120 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 77
Cpgi22814 X 79517312 to 79517507 195 CpG island CpG island 22814
Tssr163717 X 79517333 to 79517376 43 - TSS region transcription start site region 163717
DXMit44 X 79576419 to 79576600 181 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 44
Gm17817 X 79616703 to 79617599 896 + pseudogene predicted gene, 17817
Mageb16 X 79623231 to 79671435 48204 - protein coding gene melanoma antigen family B, 16
Gm8792 X 79631165 to 79631874 709 - pseudogene predicted gene 8792
Tssr163718 X 79631174 to 79631199 25 - TSS region transcription start site region 163718
Tssr163719 X 79635547 to 79635558 11 - TSS region transcription start site region 163719
Tssr163720 X 79635575 to 79635587 12 - TSS region transcription start site region 163720
Tssr163721 X 79643593 to 79643614 21 - TSS region transcription start site region 163721
Tssr163722 X 79671434 to 79671438 4 - TSS region transcription start site region 163722
Tssr163723 X 79671522 to 79671546 24 - TSS region transcription start site region 163723