Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:77770317-78370324

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bmiq12 X 36000000 to 78000000 42000000 QTL body mass index QTL 12
Prkx X 77761411 to 77796278 34867 - protein coding gene protein kinase, X-linked
Cpgi22811 X 77795282 to 77796289 1007 CpG island CpG island 22811
Tssr163690 X 77795921 to 77795985 64 - TSS region transcription start site region 163690
Tssr163691 X 77795989 to 77796007 18 - TSS region transcription start site region 163691
Gm14742 X 77802351 to 77803280 929 - lincRNA gene predicted gene 14742
Pbsn X 77837898 to 77853500 15602 - protein coding gene probasin
Tssr5640 X 77837946 to 77837953 7 - TSS region transcription start site region 5640
Tssr163692 X 77837966 to 77837976 10 - TSS region transcription start site region 163692
Tssr161370 X 77845043 to 77845048 5 + TSS region transcription start site region 161370
Tssr163693 X 77845045 to 77845088 43 - TSS region transcription start site region 163693
Tssr163694 X 77848004 to 77848017 13 - TSS region transcription start site region 163694
Tssr161371 X 77848040 to 77848044 4 + TSS region transcription start site region 161371
Tssr163695 X 77848048 to 77848051 3 - TSS region transcription start site region 163695
Tssr163696 X 77848095 to 77848109 14 - TSS region transcription start site region 163696
Tssr163697 X 77853474 to 77853504 30 - TSS region transcription start site region 163697
Tssr163698 X 77853517 to 77853528 11 - TSS region transcription start site region 163698
Gm14744 X 77864758 to 77870033 5275 + protein coding gene predicted gene 14744
5430402E10Rik X 77919786 to 77925062 5276 - protein coding gene RIKEN cDNA 5430402E10 gene
Gm14750 X 77988363 to 77992734 4371 + pseudogene predicted gene 14750
Gm14753 X 78021042 to 78021287 245 - pseudogene predicted gene 14753
Tssr163699 X 78021330 to 78021343 13 - TSS region transcription start site region 163699
Tssr5641 X 78059338 to 78059340 2 + TSS region transcription start site region 5641
Gm16458 X 78059390 to 78066587 7197 + pseudogene predicted pseudogene 16458
Tssr161372 X 78070317 to 78070324 7 + TSS region transcription start site region 161372
Obp1a X 78085505 to 78091374 5869 - protein coding gene odorant binding protein IA
Tssr163700 X 78091338 to 78091344 6 - TSS region transcription start site region 163700
Tssr163701 X 78091365 to 78091377 12 - TSS region transcription start site region 163701
Tssr161373 X 78125466 to 78125470 4 + TSS region transcription start site region 161373
Gm5938 X 78125467 to 78130403 4936 + protein coding gene predicted gene 5938
Tssr161374 X 78125499 to 78125506 7 + TSS region transcription start site region 161374
Tssr5642 X 78186774 to 78186780 6 + TSS region transcription start site region 5642
Obp1b X 78186808 to 78192242 5434 + protein coding gene odorant binding protein IB
Gm14743 X 78240462 to 78245921 5459 - protein coding gene predicted gene 14743
DXMit43a X 78332219 to 78332376 157 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 43a
Gm8749 X 78357794 to 78358124 330 - pseudogene predicted gene 8749
Tssr161375 X 78369636 to 78369671 35 + TSS region transcription start site region 161375
4930480E11Rik X 78369643 to 78371128 1485 + protein coding gene RIKEN cDNA 4930480E11 gene