Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:7641230-7721256

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Syp X 7638580 to 7653256 14676 + protein coding gene synaptophysin
Tssr160399 X 7644139 to 7644153 14 + TSS region transcription start site region 160399
Tssr160400 X 7644232 to 7644244 12 + TSS region transcription start site region 160400
Tssr160401 X 7644820 to 7644836 16 + TSS region transcription start site region 160401
DXImx21 X 7645663 to 7645823 160 DNA segment DNA segment, Chr X, Immunex 21
Cpgi22571 X 7648704 to 7648880 176 CpG island CpG island 22571
Tssr160402 X 7648718 to 7648729 11 + TSS region transcription start site region 160402
Gm14703 X 7651106 to 7657258 6152 - antisense lncRNA gene predicted gene 14703
Tssr160403 X 7651882 to 7651901 19 + TSS region transcription start site region 160403
Tssr160404 X 7651982 to 7651996 14 + TSS region transcription start site region 160404
Tssr160405 X 7652467 to 7652486 19 + TSS region transcription start site region 160405
Tssr162805 X 7652802 to 7652811 9 - TSS region transcription start site region 162805
Tssr160406 X 7652815 to 7652829 14 + TSS region transcription start site region 160406
Tssr160407 X 7652927 to 7652944 17 + TSS region transcription start site region 160407
Tssr160408 X 7652965 to 7652981 16 + TSS region transcription start site region 160408
Cpgi22572 X 7657174 to 7657503 329 CpG island CpG island 22572
Tssr160409 X 7657355 to 7657426 71 + TSS region transcription start site region 160409
Prickle3 X 7657379 to 7668186 10807 + protein coding gene prickle planar cell polarity protein 3
Tssr160410 X 7657439 to 7657450 11 + TSS region transcription start site region 160410
DXImx29 X 7659764 to 7659980 216 DNA segment DNA segment, Chr X, Immunex 29
Cpgi22573 X 7665097 to 7665252 155 CpG island CpG island 22573
Plp2 X 7667941 to 7671390 3449 - protein coding gene proteolipid protein 2
Tssr162806 X 7671341 to 7671397 56 - TSS region transcription start site region 162806
Tssr162807 X 7671400 to 7671412 12 - TSS region transcription start site region 162807
Magix X 7673166 to 7681251 8085 - protein coding gene MAGI family member, X-linked
Cpgi22574 X 7679886 to 7680164 278 CpG island CpG island 22574
DXImx1 X 7680609 to 7680863 254 DNA segment DNA segment, Chr X, Immunex 1
Tssr162808 X 7681002 to 7681032 30 - TSS region transcription start site region 162808
Tssr162809 X 7681034 to 7681045 11 - TSS region transcription start site region 162809
Tssr162810 X 7681215 to 7681229 14 - TSS region transcription start site region 162810
Tssr162811 X 7681230 to 7681256 26 - TSS region transcription start site region 162811
DXImx25 X 7685659 to 7685887 228 DNA segment DNA segment, Chr X, Immunex 25
Gm6079 X 7686951 to 7687354 403 + pseudogene predicted gene 6079
DXImx19 X 7687831 to 7687983 152 DNA segment DNA segment, Chr X, Immunex 19
Gpkow X 7697131 to 7710262 13131 + protein coding gene G patch domain and KOW motifs
Tssr160411 X 7697164 to 7697187 23 + TSS region transcription start site region 160411
Cpgi22575 X 7697165 to 7697342 177 CpG island CpG island 22575
Tssr160412 X 7697188 to 7697219 31 + TSS region transcription start site region 160412
Cpgi22576 X 7714266 to 7714457 191 CpG island CpG island 22576