Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:74321958-74812703

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65 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm39520 X 74319203 to 74328949 9746 - lncRNA gene predicted gene, 39520
Tssr161342 X 74329058 to 74329076 18 + TSS region transcription start site region 161342
Plxna3 X 74329066 to 74344689 15623 + protein coding gene plexin A3
Cpgi22797 X 74329083 to 74329292 209 CpG island CpG island 22797
Lage3 X 74352162 to 74353618 1456 - protein coding gene L antigen family, member 3
Tssr163633 X 74353576 to 74353622 46 - TSS region transcription start site region 163633
Ubl4a X 74365718 to 74368548 2830 - protein coding gene ubiquitin-like 4A
Gm44504 X 74367447 to 74373349 5902 - protein coding gene predicted readthrough transcript (NMD candidate), 44504
Cpgi22798 X 74368080 to 74368815 735 CpG island CpG island 22798
Tssr163634 X 74368472 to 74368543 71 - TSS region transcription start site region 163634
Tssr163635 X 74368547 to 74368571 24 - TSS region transcription start site region 163635
Slc10a3 X 74369217 to 74373349 4132 - protein coding gene solute carrier family 10 (sodium/bile acid cotransporter family), member 3
Cpgi22799 X 74373069 to 74373289 220 CpG island CpG island 22799
Tssr163636 X 74373235 to 74373249 14 - TSS region transcription start site region 163636
Tssr163637 X 74373260 to 74373309 49 - TSS region transcription start site region 163637
Fam3a X 74384719 to 74393272 8553 - protein coding gene family with sequence similarity 3, member A
Tssr163638 X 74392775 to 74392806 31 - TSS region transcription start site region 163638
Cpgi22800 X 74392958 to 74393265 307 CpG island CpG island 22800
Tssr163639 X 74393016 to 74393072 56 - TSS region transcription start site region 163639
Tssr163640 X 74393109 to 74393176 67 - TSS region transcription start site region 163640
Tssr163641 X 74393180 to 74393200 20 - TSS region transcription start site region 163641
Tssr163642 X 74393211 to 74393267 56 - TSS region transcription start site region 163642
Ikbkg X 74393290 to 74453854 60564 + protein coding gene inhibitor of kappaB kinase gamma
G6pdx X 74409486 to 74429161 19675 - protein coding gene glucose-6-phosphate dehydrogenase X-linked
Tssr163643 X 74410216 to 74410233 17 - TSS region transcription start site region 163643
Tssr163644 X 74410988 to 74410996 8 - TSS region transcription start site region 163644
Tssr161343 X 74424595 to 74424629 34 + TSS region transcription start site region 161343
Tssr161344 X 74424632 to 74424671 39 + TSS region transcription start site region 161344
Tssr163645 X 74425292 to 74425319 27 - TSS region transcription start site region 163645
Tssr161345 X 74425457 to 74425477 20 + TSS region transcription start site region 161345
Cpgi22801 X 74428724 to 74429284 560 CpG island CpG island 22801
Tssr163646 X 74428871 to 74428887 16 - TSS region transcription start site region 163646
Tssr163647 X 74428911 to 74428922 11 - TSS region transcription start site region 163647
Tssr161346 X 74429678 to 74429716 38 + TSS region transcription start site region 161346
Tssr161347 X 74448512 to 74448517 5 + TSS region transcription start site region 161347
Tssr161348 X 74449701 to 74449712 11 + TSS region transcription start site region 161348
Gm6880 X 74480287 to 74481399 1112 - protein coding gene predicted gene 6880
Gm6881 X 74486589 to 74487421 832 + pseudogene predicted gene 6881
Gm15361 X 74494379 to 74494822 443 - pseudogene predicted pseudogene 15361
Tssr163648 X 74494965 to 74494980 15 - TSS region transcription start site region 163648
Gm15362 X 74504015 to 74504395 380 + pseudogene predicted gene 15362
Gm15364 X 74510946 to 74511530 584 + pseudogene predicted gene 15364
Gm26125 X 74534285 to 74534391 106 + snRNA gene predicted gene, 26125
Gm4989 X 74566958 to 74567703 745 + pseudogene predicted pseudogene 4989
Olfr1326-ps1 X 74570639 to 74571400 761 - pseudogene olfactory receptor 1326, pseudogene 1
Olfr1325 X 74594328 to 74595275 947 + protein coding gene olfactory receptor 1325
Gm26417 X 74624426 to 74624560 134 + snoRNA gene predicted gene, 26417
Gm5640 X 74639119 to 74645635 6516 - protein coding gene predicted gene 5640
Xlr5d-ps X 74652679 to 74659486 6807 + pseudogene X-linked lymphocyte-regulated 5D, pseudogene
Spin2-ps2 X 74677268 to 74678045 777 - pseudogene spindlin family, member 2, pseudogene 2
Xlr3d-ps X 74696047 to 74704076 8029 + pseudogene X-linked lymphocyte-regulated 3D, pseudogene
Gm15365 X 74713502 to 74713801 299 - pseudogene predicted gene 15365
Gm22351 X 74713767 to 74713873 106 - snRNA gene predicted gene, 22351
Gm38474 X 74726307 to 74728075 1768 + lncRNA gene predicted gene, 38474
Xlr4d-ps X 74730687 to 74733950 3263 + pseudogene X-linked lymphocyte-regulated 4D, pseudogene
DXMit146b X 74736599 to 74736726 127 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 146b
Gm6890 X 74740927 to 74742188 1261 + protein coding gene predicted gene 6890
Gm14755 X 74758539 to 74758922 383 - pseudogene predicted gene 14755
Olfr1327-ps1 X 74762045 to 74762879 834 - pseudogene olfactory receptor 1327, pseudogene 1
Gm14758 X 74775685 to 74775822 137 - pseudogene predicted gene 14758
Gm14695 X 74783672 to 74786540 2868 + pseudogene predicted gene 14695
DXMit145 X 74784311 to 74784468 157 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 145
DXMit145.1 X 74784397 to 74784515 118 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 145.1
Gm8617 X 74789937 to 74792158 2221 - pseudogene predicted gene 8617
Spin2-ps3 X 74804799 to 74805560 761 + pseudogene spindlin family, member 2, pseudogene 3