MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region X:74317162-74388618

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Fam50a	X	74313033 to 74320149	7116	+	protein coding gene	family with sequence similarity 50, member A
Mir7092	X	74317362 to 74317429	67	+	miRNA gene	microRNA 7092
Gm39520	X	74319203 to 74328949	9746	-	lncRNA gene	predicted gene, 39520
Tssr161342	X	74329058 to 74329076	18	+	TSS region	transcription start site region 161342
Plxna3	X	74329066 to 74344689	15623	+	protein coding gene	plexin A3
Cpgi22797	X	74329083 to 74329292	209		CpG island	CpG island 22797
Lage3	X	74352162 to 74353618	1456	-	protein coding gene	L antigen family, member 3
Tssr163633	X	74353576 to 74353622	46	-	TSS region	transcription start site region 163633
Ubl4a	X	74365718 to 74368548	2830	-	protein coding gene	ubiquitin-like 4A
Gm44504	X	74367447 to 74373349	5902	-	protein coding gene	predicted readthrough transcript (NMD candidate), 44504
Cpgi22798	X	74368080 to 74368815	735		CpG island	CpG island 22798
Tssr163634	X	74368472 to 74368543	71	-	TSS region	transcription start site region 163634
Tssr163635	X	74368547 to 74368571	24	-	TSS region	transcription start site region 163635
Slc10a3	X	74369217 to 74373349	4132	-	protein coding gene	solute carrier family 10 (sodium/bile acid cotransporter family), member 3
Cpgi22799	X	74373069 to 74373289	220		CpG island	CpG island 22799
Tssr163636	X	74373235 to 74373249	14	-	TSS region	transcription start site region 163636
Tssr163637	X	74373260 to 74373309	49	-	TSS region	transcription start site region 163637
Fam3a	X	74384719 to 74393272	8553	-	protein coding gene	family with sequence similarity 3, member A