Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:74294486-74544161

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70 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
B230340J04Rik X 74291022 to 74295316 4294 unclassified gene RIKEN cDNA B230340J04 gene
Cpgi22794 X 74296905 to 74297488 583 CpG island CpG island 22794
Atp6ap1 X 74297097 to 74304721 7624 + protein coding gene ATPase, H+ transporting, lysosomal accessory protein 1
Tssr161324 X 74297120 to 74297178 58 + TSS region transcription start site region 161324
Tssr161325 X 74299956 to 74299960 4 + TSS region transcription start site region 161325
Tssr161326 X 74302386 to 74302401 15 + TSS region transcription start site region 161326
Tssr161327 X 74303816 to 74303833 17 + TSS region transcription start site region 161327
Tssr161328 X 74303844 to 74303888 44 + TSS region transcription start site region 161328
Tssr161329 X 74303938 to 74303984 46 + TSS region transcription start site region 161329
Tssr161330 X 74304025 to 74304036 11 + TSS region transcription start site region 161330
Tssr161331 X 74304160 to 74304171 11 + TSS region transcription start site region 161331
Tssr161332 X 74304172 to 74304191 19 + TSS region transcription start site region 161332
Tssr163632 X 74304687 to 74304691 4 - TSS region transcription start site region 163632
Cpgi22795 X 74304921 to 74305584 663 CpG island CpG island 22795
Tssr161333 X 74304992 to 74305036 44 + TSS region transcription start site region 161333
Gdi1 X 74305012 to 74311867 6855 + protein coding gene guanosine diphosphate (GDP) dissociation inhibitor 1
Tssr161334 X 74305092 to 74305106 14 + TSS region transcription start site region 161334
Tssr161335 X 74305239 to 74305278 39 + TSS region transcription start site region 161335
Tssr161336 X 74307183 to 74307196 13 + TSS region transcription start site region 161336
Tssr161337 X 74309089 to 74309105 16 + TSS region transcription start site region 161337
Tssr161338 X 74309952 to 74309972 20 + TSS region transcription start site region 161338
Tssr161339 X 74311006 to 74311019 13 + TSS region transcription start site region 161339
Cpgi22796 X 74312827 to 74313576 749 CpG island CpG island 22796
Tssr161340 X 74313014 to 74313109 95 + TSS region transcription start site region 161340
Fam50a X 74313033 to 74320149 7116 + protein coding gene family with sequence similarity 50, member A
Tssr161341 X 74313242 to 74313253 11 + TSS region transcription start site region 161341
Mir7092 X 74317362 to 74317429 67 + miRNA gene microRNA 7092
Gm39520 X 74319203 to 74328949 9746 - lncRNA gene predicted gene, 39520
Tssr161342 X 74329058 to 74329076 18 + TSS region transcription start site region 161342
Plxna3 X 74329066 to 74344689 15623 + protein coding gene plexin A3
Cpgi22797 X 74329083 to 74329292 209 CpG island CpG island 22797
Lage3 X 74352162 to 74353618 1456 - protein coding gene L antigen family, member 3
Tssr163633 X 74353576 to 74353622 46 - TSS region transcription start site region 163633
Ubl4a X 74365718 to 74368548 2830 - protein coding gene ubiquitin-like 4A
Gm44504 X 74367447 to 74373349 5902 - protein coding gene predicted readthrough transcript (NMD candidate), 44504
Cpgi22798 X 74368080 to 74368815 735 CpG island CpG island 22798
Tssr163634 X 74368472 to 74368543 71 - TSS region transcription start site region 163634
Tssr163635 X 74368547 to 74368571 24 - TSS region transcription start site region 163635
Slc10a3 X 74369217 to 74373349 4132 - protein coding gene solute carrier family 10 (sodium/bile acid cotransporter family), member 3
Cpgi22799 X 74373069 to 74373289 220 CpG island CpG island 22799
Tssr163636 X 74373235 to 74373249 14 - TSS region transcription start site region 163636
Tssr163637 X 74373260 to 74373309 49 - TSS region transcription start site region 163637
Fam3a X 74384719 to 74393272 8553 - protein coding gene family with sequence similarity 3, member A
Tssr163638 X 74392775 to 74392806 31 - TSS region transcription start site region 163638
Cpgi22800 X 74392958 to 74393265 307 CpG island CpG island 22800
Tssr163639 X 74393016 to 74393072 56 - TSS region transcription start site region 163639
Tssr163640 X 74393109 to 74393176 67 - TSS region transcription start site region 163640
Tssr163641 X 74393180 to 74393200 20 - TSS region transcription start site region 163641
Tssr163642 X 74393211 to 74393267 56 - TSS region transcription start site region 163642
Ikbkg X 74393290 to 74453854 60564 + protein coding gene inhibitor of kappaB kinase gamma
G6pdx X 74409486 to 74429161 19675 - protein coding gene glucose-6-phosphate dehydrogenase X-linked
Tssr163643 X 74410216 to 74410233 17 - TSS region transcription start site region 163643
Tssr163644 X 74410988 to 74410996 8 - TSS region transcription start site region 163644
Tssr161343 X 74424595 to 74424629 34 + TSS region transcription start site region 161343
Tssr161344 X 74424632 to 74424671 39 + TSS region transcription start site region 161344
Tssr163645 X 74425292 to 74425319 27 - TSS region transcription start site region 163645
Tssr161345 X 74425457 to 74425477 20 + TSS region transcription start site region 161345
Cpgi22801 X 74428724 to 74429284 560 CpG island CpG island 22801
Tssr163646 X 74428871 to 74428887 16 - TSS region transcription start site region 163646
Tssr163647 X 74428911 to 74428922 11 - TSS region transcription start site region 163647
Tssr161346 X 74429678 to 74429716 38 + TSS region transcription start site region 161346
Tssr161347 X 74448512 to 74448517 5 + TSS region transcription start site region 161347
Tssr161348 X 74449701 to 74449712 11 + TSS region transcription start site region 161348
Gm6880 X 74480287 to 74481399 1112 - protein coding gene predicted gene 6880
Gm6881 X 74486589 to 74487421 832 + pseudogene predicted gene 6881
Gm15361 X 74494379 to 74494822 443 - pseudogene predicted pseudogene 15361
Tssr163648 X 74494965 to 74494980 15 - TSS region transcription start site region 163648
Gm15362 X 74504015 to 74504395 380 + pseudogene predicted gene 15362
Gm15364 X 74510946 to 74511530 584 + pseudogene predicted gene 15364
Gm26125 X 74534285 to 74534391 106 + snRNA gene predicted gene, 26125