Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:73987466-74290756

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69 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm8545 X 74006702 to 74007502 800 + pseudogene predicted gene 8545
Irak1 X 74013914 to 74023918 10004 - protein coding gene interleukin-1 receptor-associated kinase 1
Tssr163609 X 74014903 to 74014917 14 - TSS region transcription start site region 163609
Cpgi22788 X 74023301 to 74024369 1068 CpG island CpG island 22788
Mir5132 X 74023528 to 74023598 70 - miRNA gene microRNA 5132
Tssr163610 X 74023797 to 74023808 11 - TSS region transcription start site region 163610
Tssr163611 X 74023817 to 74023839 22 - TSS region transcription start site region 163611
Mir718 X 74023849 to 74023936 87 - miRNA gene microRNA 718
Tssr163612 X 74023908 to 74023917 9 - TSS region transcription start site region 163612
Mecp2 X 74026592 to 74085690 59098 - protein coding gene methyl CpG binding protein 2
Tssr161304 X 74027339 to 74027340 1 + TSS region transcription start site region 161304
Tssr163613 X 74059366 to 74059370 4 - TSS region transcription start site region 163613
Tssr163614 X 74073485 to 74073489 4 - TSS region transcription start site region 163614
Tssr163615 X 74074898 to 74074936 38 - TSS region transcription start site region 163615
Cpgi22789 X 74084703 to 74085866 1163 CpG island CpG island 22789
Tssr163616 X 74085340 to 74085357 17 - TSS region transcription start site region 163616
Tssr5637 X 74085554 to 74085563 9 - TSS region transcription start site region 5637
Tssr163617 X 74085586 to 74085652 66 - TSS region transcription start site region 163617
Tssr163618 X 74085656 to 74085672 16 - TSS region transcription start site region 163618
Tssr161305 X 74127463 to 74127469 6 + TSS region transcription start site region 161305
Opn1mw X 74127466 to 74150756 23290 + protein coding gene opsin 1 (cone pigments), medium-wave-sensitive (color blindness, deutan)
Gm6758 X 74135133 to 74136187 1054 - pseudogene predicted gene 6758
Tex28 X 74150944 to 74167838 16894 - protein coding gene testis expressed 28
Rpl3-ps2 X 74170653 to 74171866 1213 + pseudogene ribosomal protein L3, pseudogene 2
Tssr161306 X 74177225 to 74177236 11 + TSS region transcription start site region 161306
Tssr161307 X 74177252 to 74177268 16 + TSS region transcription start site region 161307
Tktl1 X 74177259 to 74208498 31239 + protein coding gene transketolase-like 1
Tssr161308 X 74202412 to 74202420 8 + TSS region transcription start site region 161308
Tssr161309 X 74204914 to 74204926 12 + TSS region transcription start site region 161309
Flna X 74223461 to 74249820 26359 - protein coding gene filamin, alpha
Tssr163619 X 74224789 to 74224820 31 - TSS region transcription start site region 163619
Tssr163620 X 74229187 to 74229191 4 - TSS region transcription start site region 163620
Tssr163621 X 74241271 to 74241290 19 - TSS region transcription start site region 163621
Tssr163622 X 74244028 to 74244037 9 - TSS region transcription start site region 163622
Tssr163623 X 74244044 to 74244061 17 - TSS region transcription start site region 163623
Tssr163624 X 74245737 to 74245769 32 - TSS region transcription start site region 163624
Cpgi22790 X 74245803 to 74246594 791 CpG island CpG island 22790
Tssr163625 X 74246400 to 74246438 38 - TSS region transcription start site region 163625
Tssr163626 X 74246535 to 74246556 21 - TSS region transcription start site region 163626
Cpgi22791 X 74249641 to 74250155 514 CpG island CpG island 22791
Tssr163627 X 74249819 to 74249840 21 - TSS region transcription start site region 163627
Cpgi22792 X 74254496 to 74255275 779 CpG island CpG island 22792
Tssr161310 X 74254679 to 74254726 47 + TSS region transcription start site region 161310
Emd X 74254687 to 74261548 6861 + protein coding gene emerin
Tssr161311 X 74254736 to 74254750 14 + TSS region transcription start site region 161311
Tssr161312 X 74254782 to 74254872 90 + TSS region transcription start site region 161312
Tssr161313 X 74254877 to 74254888 11 + TSS region transcription start site region 161313
Tssr161314 X 74255051 to 74255062 11 + TSS region transcription start site region 161314
Tssr161315 X 74255174 to 74255185 11 + TSS region transcription start site region 161315
Tssr161316 X 74255263 to 74255277 14 + TSS region transcription start site region 161316
Tssr161317 X 74257417 to 74257446 29 + TSS region transcription start site region 161317
Tssr161318 X 74260889 to 74260895 6 + TSS region transcription start site region 161318
Gm14686 X 74261032 to 74261374 342 + pseudogene predicted gene 14686
Rpl10 X 74270816 to 74273135 2319 + protein coding gene ribosomal protein L10
Tssr161319 X 74270849 to 74270870 21 + TSS region transcription start site region 161319
Tssr161320 X 74271396 to 74271509 113 + TSS region transcription start site region 161320
Snora70 X 74272492 to 74272620 128 + snoRNA gene small nucleolar RNA, H/ACA box 70
Dnase1l1 X 74273217 to 74282333 9116 - protein coding gene deoxyribonuclease 1-like 1
Mir7091 X 74274027 to 74274105 78 - miRNA gene microRNA 7091
Tssr163628 X 74274915 to 74274947 32 - TSS region transcription start site region 163628
Tssr163629 X 74275014 to 74275059 45 - TSS region transcription start site region 163629
Gm14846 X 74278654 to 74278869 215 + pseudogene predicted gene 14846
Tssr163630 X 74281612 to 74281655 43 - TSS region transcription start site region 163630
Tssr163631 X 74281707 to 74281737 30 - TSS region transcription start site region 163631
Tssr161321 X 74281893 to 74281924 31 + TSS region transcription start site region 161321
Taz X 74281912 to 74290151 8239 + protein coding gene tafazzin
Cpgi22793 X 74282514 to 74282843 329 CpG island CpG island 22793
Tssr161322 X 74282722 to 74282770 48 + TSS region transcription start site region 161322
Tssr161323 X 74282778 to 74282812 34 + TSS region transcription start site region 161323