Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:73802339-74252340

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94 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pdzd4 X 73793359 to 73824969 31610 - protein coding gene PDZ domain containing 4
Tssr163576 X 73806212 to 73806219 7 - TSS region transcription start site region 163576
Gm23615 X 73809417 to 73809481 64 + snoRNA gene predicted gene, 23615
Cpgi22781 X 73823409 to 73823854 445 CpG island CpG island 22781
Cpgi22782 X 73824140 to 73825257 1117 CpG island CpG island 22782
Tssr163577 X 73824353 to 73824367 14 - TSS region transcription start site region 163577
Tssr163578 X 73824405 to 73824423 18 - TSS region transcription start site region 163578
Tssr163579 X 73824435 to 73824452 17 - TSS region transcription start site region 163579
Tssr163580 X 73824549 to 73824598 49 - TSS region transcription start site region 163580
Tssr163581 X 73824901 to 73824914 13 - TSS region transcription start site region 163581
Tssr163582 X 73824938 to 73824977 39 - TSS region transcription start site region 163582
Tssr163583 X 73824993 to 73825006 13 - TSS region transcription start site region 163583
Tssr161301 X 73853779 to 73853800 21 + TSS region transcription start site region 161301
L1cam X 73853780 to 73880838 27058 - protein coding gene L1 cell adhesion molecule
Tssr163584 X 73854391 to 73854451 60 - TSS region transcription start site region 163584
Tssr163585 X 73854468 to 73854487 19 - TSS region transcription start site region 163585
Tssr163586 X 73854537 to 73854548 11 - TSS region transcription start site region 163586
Tssr163587 X 73854582 to 73854603 21 - TSS region transcription start site region 163587
Tssr5636 X 73863033 to 73863037 4 - TSS region transcription start site region 5636
Tssr163588 X 73869831 to 73869846 15 - TSS region transcription start site region 163588
Cpgi22783 X 73880481 to 73880957 476 CpG island CpG island 22783
Tssr163589 X 73880740 to 73880815 75 - TSS region transcription start site region 163589
Tssr163590 X 73880831 to 73880840 9 - TSS region transcription start site region 163590
DXBay6 X 73886148 to 73886309 161 DNA segment DNA segment, Chr X, Baylor 6
Avpr2 X 73891798 to 73894428 2630 + protein coding gene arginine vasopressin receptor 2
Tssr161302 X 73891815 to 73891833 18 + TSS region transcription start site region 161302
Arhgap4 X 73894352 to 73911346 16994 - protein coding gene Rho GTPase activating protein 4
Cpgi22784 X 73911102 to 73911568 466 CpG island CpG island 22784
Tssr163591 X 73911283 to 73911304 21 - TSS region transcription start site region 163591
Naa10 X 73916873 to 73921944 5071 - protein coding gene N(alpha)-acetyltransferase 10, NatA catalytic subunit
Cpgi22785 X 73921405 to 73922264 859 CpG island CpG island 22785
Tssr163592 X 73921839 to 73921916 77 - TSS region transcription start site region 163592
Tssr163593 X 73921917 to 73921922 5 - TSS region transcription start site region 163593
Tssr163594 X 73921930 to 73921941 11 - TSS region transcription start site region 163594
Renbp X 73922121 to 73930850 8729 - protein coding gene renin binding protein
Tssr163595 X 73927996 to 73928020 24 - TSS region transcription start site region 163595
Tssr163596 X 73928040 to 73928057 17 - TSS region transcription start site region 163596
Tssr163597 X 73928092 to 73928101 9 - TSS region transcription start site region 163597
Tssr163598 X 73930520 to 73930532 12 - TSS region transcription start site region 163598
Tssr163599 X 73930717 to 73930728 11 - TSS region transcription start site region 163599
Tssr163600 X 73930735 to 73930750 15 - TSS region transcription start site region 163600
Tssr163601 X 73930751 to 73930823 72 - TSS region transcription start site region 163601
Tssr163602 X 73930834 to 73930851 17 - TSS region transcription start site region 163602
Hcfc1 X 73942792 to 73966357 23565 - protein coding gene host cell factor C1
Tssr163603 X 73945549 to 73945554 5 - TSS region transcription start site region 163603
Tssr163604 X 73950439 to 73950443 4 - TSS region transcription start site region 163604
Cpgi22786 X 73965827 to 73966134 307 CpG island CpG island 22786
Tssr163605 X 73965994 to 73966044 50 - TSS region transcription start site region 163605
Tssr163606 X 73966329 to 73966376 47 - TSS region transcription start site region 163606
Cpgi22787 X 73966460 to 73967874 1414 CpG island CpG island 22787
Tssr161303 X 73966485 to 73966506 21 + TSS region transcription start site region 161303
Tssr163607 X 73966750 to 73966753 3 - TSS region transcription start site region 163607
Tssr163608 X 73966973 to 73967008 35 - TSS region transcription start site region 163608
Gm8545 X 74006702 to 74007502 800 + pseudogene predicted gene 8545
Irak1 X 74013914 to 74023918 10004 - protein coding gene interleukin-1 receptor-associated kinase 1
Tssr163609 X 74014903 to 74014917 14 - TSS region transcription start site region 163609
Cpgi22788 X 74023301 to 74024369 1068 CpG island CpG island 22788
Mir5132 X 74023528 to 74023598 70 - miRNA gene microRNA 5132
Tssr163610 X 74023797 to 74023808 11 - TSS region transcription start site region 163610
Tssr163611 X 74023817 to 74023839 22 - TSS region transcription start site region 163611
Mir718 X 74023849 to 74023936 87 - miRNA gene microRNA 718
Tssr163612 X 74023908 to 74023917 9 - TSS region transcription start site region 163612
Mecp2 X 74026592 to 74085690 59098 - protein coding gene methyl CpG binding protein 2
Tssr161304 X 74027339 to 74027340 1 + TSS region transcription start site region 161304
Tssr163613 X 74059366 to 74059370 4 - TSS region transcription start site region 163613
Tssr163614 X 74073485 to 74073489 4 - TSS region transcription start site region 163614
Tssr163615 X 74074898 to 74074936 38 - TSS region transcription start site region 163615
Cpgi22789 X 74084703 to 74085866 1163 CpG island CpG island 22789
Tssr163616 X 74085340 to 74085357 17 - TSS region transcription start site region 163616
Tssr5637 X 74085554 to 74085563 9 - TSS region transcription start site region 5637
Tssr163617 X 74085586 to 74085652 66 - TSS region transcription start site region 163617
Tssr163618 X 74085656 to 74085672 16 - TSS region transcription start site region 163618
Tssr161305 X 74127463 to 74127469 6 + TSS region transcription start site region 161305
Opn1mw X 74127466 to 74150756 23290 + protein coding gene opsin 1 (cone pigments), medium-wave-sensitive (color blindness, deutan)
Gm6758 X 74135133 to 74136187 1054 - pseudogene predicted gene 6758
Tex28 X 74150944 to 74167838 16894 - protein coding gene testis expressed 28
Rpl3-ps2 X 74170653 to 74171866 1213 + pseudogene ribosomal protein L3, pseudogene 2
Tssr161306 X 74177225 to 74177236 11 + TSS region transcription start site region 161306
Tssr161307 X 74177252 to 74177268 16 + TSS region transcription start site region 161307
Tktl1 X 74177259 to 74208498 31239 + protein coding gene transketolase-like 1
Tssr161308 X 74202412 to 74202420 8 + TSS region transcription start site region 161308
Tssr161309 X 74204914 to 74204926 12 + TSS region transcription start site region 161309
Flna X 74223461 to 74249820 26359 - protein coding gene filamin, alpha
Tssr163619 X 74224789 to 74224820 31 - TSS region transcription start site region 163619
Tssr163620 X 74229187 to 74229191 4 - TSS region transcription start site region 163620
Tssr163621 X 74241271 to 74241290 19 - TSS region transcription start site region 163621
Tssr163622 X 74244028 to 74244037 9 - TSS region transcription start site region 163622
Tssr163623 X 74244044 to 74244061 17 - TSS region transcription start site region 163623
Tssr163624 X 74245737 to 74245769 32 - TSS region transcription start site region 163624
Cpgi22790 X 74245803 to 74246594 791 CpG island CpG island 22790
Tssr163625 X 74246400 to 74246438 38 - TSS region transcription start site region 163625
Tssr163626 X 74246535 to 74246556 21 - TSS region transcription start site region 163626
Cpgi22791 X 74249641 to 74250155 514 CpG island CpG island 22791
Tssr163627 X 74249819 to 74249840 21 - TSS region transcription start site region 163627