Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:73682028-73895828

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77 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc6a8 X 73673150 to 73682502 9352 + protein coding gene solute carrier family 6 (neurotransmitter transporter, creatine), member 8
Bcap31 X 73686178 to 73716175 29997 - protein coding gene B cell receptor associated protein 31
Tssr163559 X 73689581 to 73689623 42 - TSS region transcription start site region 163559
Tssr163560 X 73695244 to 73695247 3 - TSS region transcription start site region 163560
Tssr163561 X 73712522 to 73712543 21 - TSS region transcription start site region 163561
Cpgi22777 X 73716081 to 73716618 537 CpG island CpG island 22777
Tssr163562 X 73716145 to 73716187 42 - TSS region transcription start site region 163562
Tssr163563 X 73716198 to 73716209 11 - TSS region transcription start site region 163563
Tssr163564 X 73716442 to 73716466 24 - TSS region transcription start site region 163564
Tssr161281 X 73716577 to 73716618 41 + TSS region transcription start site region 161281
Abcd1 X 73716597 to 73738534 21937 + protein coding gene ATP-binding cassette, sub-family D (ALD), member 1
Tssr161282 X 73716712 to 73716750 38 + TSS region transcription start site region 161282
Tssr161283 X 73716753 to 73716779 26 + TSS region transcription start site region 161283
Tssr161284 X 73716786 to 73716799 13 + TSS region transcription start site region 161284
Tssr161285 X 73716939 to 73717064 125 + TSS region transcription start site region 161285
Cpgi22778 X 73717059 to 73717415 356 CpG island CpG island 22778
Tssr163565 X 73717830 to 73717842 12 - TSS region transcription start site region 163565
Tssr163566 X 73717850 to 73717864 14 - TSS region transcription start site region 163566
Tssr161286 X 73734101 to 73734128 27 + TSS region transcription start site region 161286
Tssr161287 X 73734564 to 73734575 11 + TSS region transcription start site region 161287
Tssr161288 X 73737789 to 73737806 17 + TSS region transcription start site region 161288
Tssr163567 X 73739239 to 73739245 6 - TSS region transcription start site region 163567
Gm25226 X 73752674 to 73752796 122 + snoRNA gene predicted gene, 25226
Tssr161289 X 73757044 to 73757061 17 + TSS region transcription start site region 161289
Tssr161290 X 73757069 to 73757111 42 + TSS region transcription start site region 161290
Plxnb3 X 73757090 to 73772514 15424 + protein coding gene plexin B3
Tssr161291 X 73765519 to 73765584 65 + TSS region transcription start site region 161291
Tssr161292 X 73774397 to 73774412 15 + TSS region transcription start site region 161292
Srpk3 X 73774405 to 73778925 4520 + protein coding gene serine/arginine-rich protein specific kinase 3
Tssr161293 X 73774423 to 73774434 11 + TSS region transcription start site region 161293
Tssr161294 X 73774436 to 73774454 18 + TSS region transcription start site region 161294
Idh3g X 73778963 to 73786897 7934 - protein coding gene isocitrate dehydrogenase 3 (NAD+), gamma
Tssr163568 X 73780105 to 73780126 21 - TSS region transcription start site region 163568
Tssr163569 X 73780260 to 73780282 22 - TSS region transcription start site region 163569
Tssr163570 X 73781784 to 73781792 8 - TSS region transcription start site region 163570
Tssr163571 X 73786593 to 73786626 33 - TSS region transcription start site region 163571
Cpgi22779 X 73786624 to 73787527 903 CpG island CpG island 22779
Tssr163572 X 73786852 to 73786871 19 - TSS region transcription start site region 163572
Tssr163573 X 73786888 to 73786899 11 - TSS region transcription start site region 163573
Tssr161295 X 73787002 to 73787017 15 + TSS region transcription start site region 161295
Ssr4 X 73787028 to 73790828 3800 + protein coding gene signal sequence receptor, delta
Tssr163574 X 73787033 to 73787059 26 - TSS region transcription start site region 163574
Tssr163575 X 73787079 to 73787098 19 - TSS region transcription start site region 163575
Tssr161296 X 73787092 to 73787101 9 + TSS region transcription start site region 161296
Tssr161297 X 73787108 to 73787115 7 + TSS region transcription start site region 161297
Tssr161298 X 73787126 to 73787131 5 + TSS region transcription start site region 161298
Tssr161299 X 73787133 to 73787198 65 + TSS region transcription start site region 161299
Tssr161300 X 73787203 to 73787230 27 + TSS region transcription start site region 161300
Pdzd4 X 73793359 to 73824969 31610 - protein coding gene PDZ domain containing 4
Cpgi22780 X 73794731 to 73794950 219 CpG island CpG island 22780
Gm14817 X 73795215 to 73797616 2401 + unclassified non-coding RNA gene predicted gene 14817
Tssr163576 X 73806212 to 73806219 7 - TSS region transcription start site region 163576
Gm23615 X 73809417 to 73809481 64 + snoRNA gene predicted gene, 23615
Cpgi22781 X 73823409 to 73823854 445 CpG island CpG island 22781
Cpgi22782 X 73824140 to 73825257 1117 CpG island CpG island 22782
Tssr163577 X 73824353 to 73824367 14 - TSS region transcription start site region 163577
Tssr163578 X 73824405 to 73824423 18 - TSS region transcription start site region 163578
Tssr163579 X 73824435 to 73824452 17 - TSS region transcription start site region 163579
Tssr163580 X 73824549 to 73824598 49 - TSS region transcription start site region 163580
Tssr163581 X 73824901 to 73824914 13 - TSS region transcription start site region 163581
Tssr163582 X 73824938 to 73824977 39 - TSS region transcription start site region 163582
Tssr163583 X 73824993 to 73825006 13 - TSS region transcription start site region 163583
Tssr161301 X 73853779 to 73853800 21 + TSS region transcription start site region 161301
L1cam X 73853780 to 73880838 27058 - protein coding gene L1 cell adhesion molecule
Tssr163584 X 73854391 to 73854451 60 - TSS region transcription start site region 163584
Tssr163585 X 73854468 to 73854487 19 - TSS region transcription start site region 163585
Tssr163586 X 73854537 to 73854548 11 - TSS region transcription start site region 163586
Tssr163587 X 73854582 to 73854603 21 - TSS region transcription start site region 163587
Tssr5636 X 73863033 to 73863037 4 - TSS region transcription start site region 5636
Tssr163588 X 73869831 to 73869846 15 - TSS region transcription start site region 163588
Cpgi22783 X 73880481 to 73880957 476 CpG island CpG island 22783
Tssr163589 X 73880740 to 73880815 75 - TSS region transcription start site region 163589
Tssr163590 X 73880831 to 73880840 9 - TSS region transcription start site region 163590
DXBay6 X 73886148 to 73886309 161 DNA segment DNA segment, Chr X, Baylor 6
Avpr2 X 73891798 to 73894428 2630 + protein coding gene arginine vasopressin receptor 2
Tssr161302 X 73891815 to 73891833 18 + TSS region transcription start site region 161302
Arhgap4 X 73894352 to 73911346 16994 - protein coding gene Rho GTPase activating protein 4