Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:73533458-73683461

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Atp2b3 X 73503086 to 73571005 67919 + protein coding gene ATPase, Ca++ transporting, plasma membrane 3
Tssr161258 X 73570404 to 73570416 12 + TSS region transcription start site region 161258
DXMit1004 X 73570530 to 73570649 119 DNA segment DNA Segment, Chr X, Massachusetts Institute of Technology 1004
Gm9730 X 73578128 to 73584000 5872 - pseudogene predicted gene 9730
Tssr161259 X 73608458 to 73608461 3 + TSS region transcription start site region 161259
Gm46680 X 73624480 to 73636167 11687 - lncRNA gene predicted gene, 46680
Tssr161260 X 73635562 to 73635570 8 + TSS region transcription start site region 161260
Cpgi22772 X 73637204 to 73637566 362 CpG island CpG island 22772
Cpgi22773 X 73639232 to 73639748 516 CpG island CpG island 22773
Tssr161261 X 73639388 to 73639395 7 + TSS region transcription start site region 161261
Tssr161262 X 73639398 to 73639410 12 + TSS region transcription start site region 161262
Tssr161263 X 73639414 to 73639436 22 + TSS region transcription start site region 161263
Dusp9 X 73639419 to 73643514 4095 + protein coding gene dual specificity phosphatase 9
Tssr161264 X 73639439 to 73639442 3 + TSS region transcription start site region 161264
Cpgi22774 X 73639972 to 73640604 632 CpG island CpG island 22774
Tssr161265 X 73640117 to 73640129 12 + TSS region transcription start site region 161265
Tssr161266 X 73640161 to 73640172 11 + TSS region transcription start site region 161266
Tssr161267 X 73640178 to 73640186 8 + TSS region transcription start site region 161267
Tssr161268 X 73640370 to 73640377 7 + TSS region transcription start site region 161268
Tssr161269 X 73640751 to 73640782 31 + TSS region transcription start site region 161269
Tssr161270 X 73641450 to 73641462 12 + TSS region transcription start site region 161270
Pnck X 73655992 to 73660111 4119 - protein coding gene pregnancy upregulated non-ubiquitously expressed CaM kinase
Cpgi22775 X 73659668 to 73660309 641 CpG island CpG island 22775
Tssr163556 X 73659835 to 73659877 42 - TSS region transcription start site region 163556
Tssr163557 X 73660047 to 73660093 46 - TSS region transcription start site region 163557
Gm32261 X 73669001 to 73673049 4048 - lncRNA gene predicted gene, 32261
Cpgi22776 X 73672769 to 73674377 1608 CpG island CpG island 22776
Tssr163558 X 73673021 to 73673035 14 - TSS region transcription start site region 163558
Tssr161271 X 73673129 to 73673135 6 + TSS region transcription start site region 161271
Slc6a8 X 73673150 to 73682502 9352 + protein coding gene solute carrier family 6 (neurotransmitter transporter, creatine), member 8
Tssr161272 X 73673156 to 73673174 18 + TSS region transcription start site region 161272
Tssr161273 X 73675446 to 73675449 3 + TSS region transcription start site region 161273
Tssr161274 X 73675500 to 73675516 16 + TSS region transcription start site region 161274
Tssr161275 X 73675531 to 73675538 7 + TSS region transcription start site region 161275
Tssr161276 X 73675540 to 73675547 7 + TSS region transcription start site region 161276
Tssr161277 X 73676713 to 73676725 12 + TSS region transcription start site region 161277
Tssr161278 X 73681217 to 73681238 21 + TSS region transcription start site region 161278
Tssr161279 X 73681666 to 73681680 14 + TSS region transcription start site region 161279
Tssr161280 X 73681706 to 73681742 36 + TSS region transcription start site region 161280