Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:73493458-73723461

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99 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bgn X 73483602 to 73495933 12331 + protein coding gene biglycan
Tssr161228 X 73494598 to 73494609 11 + TSS region transcription start site region 161228
Tssr163547 X 73494618 to 73494677 59 - TSS region transcription start site region 163547
Tssr161229 X 73494631 to 73494642 11 + TSS region transcription start site region 161229
Tssr161230 X 73494655 to 73494666 11 + TSS region transcription start site region 161230
Tssr161231 X 73494672 to 73494691 19 + TSS region transcription start site region 161231
Tssr5634 X 73494697 to 73494721 24 - TSS region transcription start site region 5634
Tssr161232 X 73494723 to 73494736 13 + TSS region transcription start site region 161232
Tssr163548 X 73494724 to 73494749 25 - TSS region transcription start site region 163548
Tssr161233 X 73494795 to 73494810 15 + TSS region transcription start site region 161233
Tssr163549 X 73494801 to 73494815 14 - TSS region transcription start site region 163549
Tssr161234 X 73494815 to 73494834 19 + TSS region transcription start site region 161234
Tssr163550 X 73494856 to 73494878 22 - TSS region transcription start site region 163550
Tssr161235 X 73494880 to 73494916 36 + TSS region transcription start site region 161235
Tssr161236 X 73494923 to 73494963 40 + TSS region transcription start site region 161236
Tssr163551 X 73494941 to 73495036 95 - TSS region transcription start site region 163551
Tssr161237 X 73494977 to 73494988 11 + TSS region transcription start site region 161237
Tssr161238 X 73495013 to 73495024 11 + TSS region transcription start site region 161238
Tssr5635 X 73495052 to 73495064 12 - TSS region transcription start site region 5635
Tssr161239 X 73495062 to 73495075 13 + TSS region transcription start site region 161239
Tssr163552 X 73495067 to 73495098 31 - TSS region transcription start site region 163552
Tssr161240 X 73495076 to 73495109 33 + TSS region transcription start site region 161240
Tssr161241 X 73495112 to 73495132 20 + TSS region transcription start site region 161241
Tssr161242 X 73495145 to 73495303 158 + TSS region transcription start site region 161242
Tssr163553 X 73495153 to 73495171 18 - TSS region transcription start site region 163553
Tssr163554 X 73495172 to 73495196 24 - TSS region transcription start site region 163554
Tssr163555 X 73495199 to 73495294 95 - TSS region transcription start site region 163555
Tssr161243 X 73495309 to 73495332 23 + TSS region transcription start site region 161243
Tssr161244 X 73495333 to 73495402 69 + TSS region transcription start site region 161244
Tssr161245 X 73495428 to 73495452 24 + TSS region transcription start site region 161245
Tssr161246 X 73495584 to 73495595 11 + TSS region transcription start site region 161246
Tssr161247 X 73495607 to 73495630 23 + TSS region transcription start site region 161247
Tssr161248 X 73495876 to 73495888 12 + TSS region transcription start site region 161248
Cpgi22771 X 73502692 to 73503942 1250 CpG island CpG island 22771
Tssr161249 X 73502742 to 73502753 11 + TSS region transcription start site region 161249
Tssr161250 X 73502777 to 73502818 41 + TSS region transcription start site region 161250
Tssr161251 X 73502842 to 73502884 42 + TSS region transcription start site region 161251
Tssr161252 X 73503074 to 73503116 42 + TSS region transcription start site region 161252
Atp2b3 X 73503086 to 73571005 67919 + protein coding gene ATPase, Ca++ transporting, plasma membrane 3
Tssr161253 X 73503117 to 73503135 18 + TSS region transcription start site region 161253
Tssr161254 X 73503153 to 73503170 17 + TSS region transcription start site region 161254
Tssr161255 X 73517280 to 73517304 24 + TSS region transcription start site region 161255
Tssr161256 X 73521091 to 73521117 26 + TSS region transcription start site region 161256
Tssr161257 X 73528677 to 73528711 34 + TSS region transcription start site region 161257
Tssr161258 X 73570404 to 73570416 12 + TSS region transcription start site region 161258
DXMit1004 X 73570530 to 73570649 119 DNA segment DNA Segment, Chr X, Massachusetts Institute of Technology 1004
Gm9730 X 73578128 to 73584000 5872 - pseudogene predicted gene 9730
Tssr161259 X 73608458 to 73608461 3 + TSS region transcription start site region 161259
Gm46680 X 73624480 to 73636167 11687 - lncRNA gene predicted gene, 46680
Tssr161260 X 73635562 to 73635570 8 + TSS region transcription start site region 161260
Cpgi22772 X 73637204 to 73637566 362 CpG island CpG island 22772
Cpgi22773 X 73639232 to 73639748 516 CpG island CpG island 22773
Tssr161261 X 73639388 to 73639395 7 + TSS region transcription start site region 161261
Tssr161262 X 73639398 to 73639410 12 + TSS region transcription start site region 161262
Tssr161263 X 73639414 to 73639436 22 + TSS region transcription start site region 161263
Dusp9 X 73639419 to 73643514 4095 + protein coding gene dual specificity phosphatase 9
Tssr161264 X 73639439 to 73639442 3 + TSS region transcription start site region 161264
Cpgi22774 X 73639972 to 73640604 632 CpG island CpG island 22774
Tssr161265 X 73640117 to 73640129 12 + TSS region transcription start site region 161265
Tssr161266 X 73640161 to 73640172 11 + TSS region transcription start site region 161266
Tssr161267 X 73640178 to 73640186 8 + TSS region transcription start site region 161267
Tssr161268 X 73640370 to 73640377 7 + TSS region transcription start site region 161268
Tssr161269 X 73640751 to 73640782 31 + TSS region transcription start site region 161269
Tssr161270 X 73641450 to 73641462 12 + TSS region transcription start site region 161270
Pnck X 73655992 to 73660111 4119 - protein coding gene pregnancy upregulated non-ubiquitously expressed CaM kinase
Cpgi22775 X 73659668 to 73660309 641 CpG island CpG island 22775
Tssr163556 X 73659835 to 73659877 42 - TSS region transcription start site region 163556
Tssr163557 X 73660047 to 73660093 46 - TSS region transcription start site region 163557
Gm32261 X 73669001 to 73673049 4048 - lncRNA gene predicted gene, 32261
Cpgi22776 X 73672769 to 73674377 1608 CpG island CpG island 22776
Tssr163558 X 73673021 to 73673035 14 - TSS region transcription start site region 163558
Tssr161271 X 73673129 to 73673135 6 + TSS region transcription start site region 161271
Slc6a8 X 73673150 to 73682502 9352 + protein coding gene solute carrier family 6 (neurotransmitter transporter, creatine), member 8
Tssr161272 X 73673156 to 73673174 18 + TSS region transcription start site region 161272
Tssr161273 X 73675446 to 73675449 3 + TSS region transcription start site region 161273
Tssr161274 X 73675500 to 73675516 16 + TSS region transcription start site region 161274
Tssr161275 X 73675531 to 73675538 7 + TSS region transcription start site region 161275
Tssr161276 X 73675540 to 73675547 7 + TSS region transcription start site region 161276
Tssr161277 X 73676713 to 73676725 12 + TSS region transcription start site region 161277
Tssr161278 X 73681217 to 73681238 21 + TSS region transcription start site region 161278
Tssr161279 X 73681666 to 73681680 14 + TSS region transcription start site region 161279
Tssr161280 X 73681706 to 73681742 36 + TSS region transcription start site region 161280
Bcap31 X 73686178 to 73716175 29997 - protein coding gene B cell receptor associated protein 31
Tssr163559 X 73689581 to 73689623 42 - TSS region transcription start site region 163559
Tssr163560 X 73695244 to 73695247 3 - TSS region transcription start site region 163560
Tssr163561 X 73712522 to 73712543 21 - TSS region transcription start site region 163561
Cpgi22777 X 73716081 to 73716618 537 CpG island CpG island 22777
Tssr163562 X 73716145 to 73716187 42 - TSS region transcription start site region 163562
Tssr163563 X 73716198 to 73716209 11 - TSS region transcription start site region 163563
Tssr163564 X 73716442 to 73716466 24 - TSS region transcription start site region 163564
Tssr161281 X 73716577 to 73716618 41 + TSS region transcription start site region 161281
Abcd1 X 73716597 to 73738534 21937 + protein coding gene ATP-binding cassette, sub-family D (ALD), member 1
Tssr161282 X 73716712 to 73716750 38 + TSS region transcription start site region 161282
Tssr161283 X 73716753 to 73716779 26 + TSS region transcription start site region 161283
Tssr161284 X 73716786 to 73716799 13 + TSS region transcription start site region 161284
Tssr161285 X 73716939 to 73717064 125 + TSS region transcription start site region 161285
Cpgi22778 X 73717059 to 73717415 356 CpG island CpG island 22778
Tssr163565 X 73717830 to 73717842 12 - TSS region transcription start site region 163565
Tssr163566 X 73717850 to 73717864 14 - TSS region transcription start site region 163566