Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:73223345-73493357

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66 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi22765 X 73228140 to 73229285 1145 CpG island CpG island 22765
Tssr161197 X 73228272 to 73228314 42 + TSS region transcription start site region 161197
F8a X 73228306 to 73230795 2489 + protein coding gene factor 8-associated gene A
DXMit146a X 73231798 to 73231945 147 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 146a
Xlr4c X 73234076 to 73243130 9054 - protein coding gene X-linked lymphocyte-regulated 4C
Tssr163538 X 73242985 to 73243025 40 - TSS region transcription start site region 163538
Xlr3c X 73254540 to 73265390 10850 - protein coding gene X-linked lymphocyte-regulated 3C
Xlr5c X 73282896 to 73292976 10080 - protein coding gene X-linked lymphocyte-regulated 5C
Gm5639 X 73297610 to 73299979 2369 + pseudogene predicted pseudogene 5639
Gm8501 X 73313203 to 73313634 431 + pseudogene predicted gene 8501
Gm32150 X 73320718 to 73333675 12957 - lncRNA gene predicted gene, 32150
Gm45015 X 73334996 to 73336840 1844 - protein coding gene predicted gene 45015
Gm7028 X 73335679 to 73336324 645 + pseudogene predicted gene 7028
Cpgi22766 X 73342498 to 73343116 618 CpG island CpG island 22766
Tssr161198 X 73342587 to 73342606 19 + TSS region transcription start site region 161198
Tssr161199 X 73342614 to 73342629 15 + TSS region transcription start site region 161199
Zfp275 X 73342621 to 73359080 16459 + protein coding gene zinc finger protein 275
Tssr161200 X 73342650 to 73342661 11 + TSS region transcription start site region 161200
Tssr161201 X 73356434 to 73356445 11 + TSS region transcription start site region 161201
Tssr161202 X 73358345 to 73358357 12 + TSS region transcription start site region 161202
DXMit176 X 73381643 to 73381791 148 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 176
Gm18336 X 73396889 to 73398712 1823 - protein coding gene predicted gene, 18336
Cpgi22767 X 73401024 to 73401225 201 CpG island CpG island 22767
Tssr163539 X 73401694 to 73401709 15 - TSS region transcription start site region 163539
Tssr163540 X 73401711 to 73401723 12 - TSS region transcription start site region 163540
Gm26726 X 73402211 to 73411436 9225 - antisense lncRNA gene predicted gene, 26726
Gm37741 X 73407676 to 73408931 1255 + unclassified gene predicted gene, 37741
Cpgi22768 X 73410949 to 73411208 259 CpG island CpG island 22768
Zfp92 X 73411096 to 73428385 17289 + protein coding gene zinc finger protein 92
Tssr161203 X 73411097 to 73411125 28 + TSS region transcription start site region 161203
Tssr161204 X 73420706 to 73420708 2 + TSS region transcription start site region 161204
Cpgi22769 X 73421918 to 73422541 623 CpG island CpG island 22769
Trex2 X 73433705 to 73435343 1638 - protein coding gene three prime repair exonuclease 2
Tssr163541 X 73435332 to 73435350 18 - TSS region transcription start site region 163541
Haus7 X 73437315 to 73459029 21714 - protein coding gene HAUS augmin-like complex, subunit 7
Cpgi22770 X 73458879 to 73459136 257 CpG island CpG island 22770
Tssr163542 X 73458945 to 73458980 35 - TSS region transcription start site region 163542
Tssr163543 X 73458990 to 73459044 54 - TSS region transcription start site region 163543
Tssr161205 X 73483580 to 73483588 8 + TSS region transcription start site region 161205
Bgn X 73483602 to 73495933 12331 + protein coding gene biglycan
Tssr161206 X 73483625 to 73483644 19 + TSS region transcription start site region 161206
Tssr161207 X 73483688 to 73483693 5 + TSS region transcription start site region 161207
Tssr161208 X 73490763 to 73490787 24 + TSS region transcription start site region 161208
Tssr161209 X 73490797 to 73490810 13 + TSS region transcription start site region 161209
Tssr161210 X 73490820 to 73490829 9 + TSS region transcription start site region 161210
Tssr161211 X 73490849 to 73490875 26 + TSS region transcription start site region 161211
Tssr161212 X 73490904 to 73490941 37 + TSS region transcription start site region 161212
Tssr161213 X 73490971 to 73490995 24 + TSS region transcription start site region 161213
Tssr161214 X 73491314 to 73491365 51 + TSS region transcription start site region 161214
Tssr163544 X 73491402 to 73491436 34 - TSS region transcription start site region 163544
Tssr161215 X 73491965 to 73492004 39 + TSS region transcription start site region 161215
Tssr161216 X 73492011 to 73492022 11 + TSS region transcription start site region 161216
Tssr161217 X 73492043 to 73492061 18 + TSS region transcription start site region 161217
Tssr163545 X 73492050 to 73492063 13 - TSS region transcription start site region 163545
Tssr161218 X 73492063 to 73492074 11 + TSS region transcription start site region 161218
Tssr163546 X 73492081 to 73492127 46 - TSS region transcription start site region 163546
Tssr161219 X 73492121 to 73492135 14 + TSS region transcription start site region 161219
Tssr161220 X 73492726 to 73492738 12 + TSS region transcription start site region 161220
Tssr161221 X 73492740 to 73492797 57 + TSS region transcription start site region 161221
Tssr161222 X 73492804 to 73492812 8 + TSS region transcription start site region 161222
Tssr161223 X 73492970 to 73492982 12 + TSS region transcription start site region 161223
Tssr161224 X 73493010 to 73493036 26 + TSS region transcription start site region 161224
Tssr161225 X 73493194 to 73493214 20 + TSS region transcription start site region 161225
Tssr161226 X 73493236 to 73493265 29 + TSS region transcription start site region 161226
Tssr5633 X 73493266 to 73493277 11 + TSS region transcription start site region 5633
Tssr161227 X 73493280 to 73493315 35 + TSS region transcription start site region 161227