Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:72957621-73269113

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nsdhl X 72918557 to 72958514 39957 + protein coding gene NAD(P) dependent steroid dehydrogenase-like
Tssr161191 X 72957828 to 72957836 8 + TSS region transcription start site region 161191
Gm14684 X 72981823 to 72982344 521 + lincRNA gene predicted gene 14684
Cpgi22764 X 72987187 to 72987711 524 CpG island CpG island 22764
Zfp185 X 72987339 to 73031543 44204 + protein coding gene zinc finger protein 185
Tssr161192 X 72987352 to 72987366 14 + TSS region transcription start site region 161192
Mir2137 X 72992079 to 72992144 65 + miRNA gene microRNA 2137
Tssr161193 X 72997248 to 72997255 7 + TSS region transcription start site region 161193
Tssr161194 X 72997261 to 72997268 7 + TSS region transcription start site region 161194
Tssr161195 X 72997279 to 72997286 7 + TSS region transcription start site region 161195
DXMit1.2 X 73028439 to 73028544 105 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 1.2
DXMit1.1 X 73028444 to 73028541 97 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 1.1
Pnma5 X 73033981 to 73037103 3122 - protein coding gene paraneoplastic antigen family 5
Tssr163536 X 73039688 to 73039701 13 - TSS region transcription start site region 163536
Gm6858 X 73049882 to 73050561 679 + pseudogene predicted gene 6858
Tssr161196 X 73064234 to 73064256 22 + TSS region transcription start site region 161196
Pnma3 X 73064787 to 73068191 3404 + protein coding gene paraneoplastic antigen MA3
Xlr4a X 73074345 to 73082478 8133 - protein coding gene X-linked lymphocyte-regulated 4A
Tssr163537 X 73082411 to 73082434 23 - TSS region transcription start site region 163537
Xlr3a X 73086293 to 73097095 10802 - protein coding gene X-linked lymphocyte-regulated 3A
Gm20455 X 73097187 to 73104886 7699 + unclassified non-coding RNA gene predicted gene 20455
Xlr5a X 73107621 to 73119113 11492 - protein coding gene X-linked lymphocyte-regulated 5A
Gm14685 X 73117047 to 73129262 12215 + protein coding gene predicted gene 14685
DXBay18 X 73137232 to 73149450 12218 - protein coding gene DNA segment, Chr X, Baylor 18
Xlr5b X 73148796 to 73158872 10076 + protein coding gene X-linked lymphocyte-regulated 5B
Spin2d X 73175302 to 73176989 1687 - protein coding gene spindlin family, member 2D
Xlr3b X 73192207 to 73202930 10723 + protein coding gene X-linked lymphocyte-regulated 3B
Xlr4b X 73214333 to 73222453 8120 + protein coding gene X-linked lymphocyte-regulated 4B
Cpgi22765 X 73228140 to 73229285 1145 CpG island CpG island 22765
Tssr161197 X 73228272 to 73228314 42 + TSS region transcription start site region 161197
F8a X 73228306 to 73230795 2489 + protein coding gene factor 8-associated gene A
DXMit146a X 73231798 to 73231945 147 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 146a
Xlr4c X 73234076 to 73243130 9054 - protein coding gene X-linked lymphocyte-regulated 4C
Tssr163538 X 73242985 to 73243025 40 - TSS region transcription start site region 163538
Xlr3c X 73254540 to 73265390 10850 - protein coding gene X-linked lymphocyte-regulated 3C
Shm4 X 103019114 to 73028444 -29990670 QTL sperm head morphology 4