Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:7221877-7422072

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Clcn5 X 7153810 to 7319358 165548 - protein coding gene chloride channel, voltage-sensitive 5
Gm26401 X 7229775 to 7229850 75 + snoRNA gene predicted gene, 26401
Tssr162775 X 7235152 to 7235157 5 - TSS region transcription start site region 162775
Mir500 X 7237683 to 7237774 91 - miRNA gene microRNA 500
Tssr162776 X 7237689 to 7237694 5 - TSS region transcription start site region 162776
Mir501 X 7241243 to 7241351 108 - miRNA gene microRNA 501
Mir362 X 7241982 to 7242046 64 - miRNA gene microRNA 362
Mir188 X 7247989 to 7248056 67 - miRNA gene microRNA 188
Mir532 X 7248402 to 7248497 95 - miRNA gene microRNA 532
DXImx35 X 7276832 to 7277076 244 DNA segment DNA segment, Chr X, Immunex 35
DXImx36 X 7312379 to 7312610 231 DNA segment DNA segment, Chr X, Immunex 36
DXImx5 X 7315495 to 7315699 204 DNA segment DNA segment, Chr X, Immunex 5
Cpgi22565 X 7318569 to 7319504 935 CpG island CpG island 22565
Tssr162777 X 7319157 to 7319178 21 - TSS region transcription start site region 162777
Tssr162778 X 7319186 to 7319257 71 - TSS region transcription start site region 162778
Tssr162779 X 7319260 to 7319288 28 - TSS region transcription start site region 162779
Tssr162780 X 7319291 to 7319331 40 - TSS region transcription start site region 162780
DXImx31 X 7321877 to 7322072 195 DNA segment DNA segment, Chr X, Immunex 31
DXImx32 X 7325759 to 7325892 133 DNA segment DNA segment, Chr X, Immunex 32
DXImx34 X 7343074 to 7343236 162 DNA segment DNA segment, Chr X, Immunex 34
DXImx33 X 7344262 to 7344449 187 DNA segment DNA segment, Chr X, Immunex 33
DXMit55 X 7360056 to 7360192 136 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 55
Usp27x X 7372591 to 7375830 3239 - protein coding gene ubiquitin specific peptidase 27, X chromosome
DXImx4 X 7372672 to 7372881 209 DNA segment DNA segment, Chr X, Immunex 4
Cpgi22566 X 7374952 to 7376349 1397 CpG island CpG island 22566
Gm14379 X 7375925 to 7378042 2117 + lncRNA gene predicted gene 14379
DXImx24 X 7399426 to 7399559 133 DNA segment DNA segment, Chr X, Immunex 24
DXImx7 X 7407644 to 7407888 244 DNA segment DNA segment, Chr X, Immunex 7
2010204K13Rik X 7411817 to 7422988 11171 - lncRNA gene RIKEN cDNA 2010204K13 gene
Tssr162781 X 7412734 to 7412741 7 - TSS region transcription start site region 162781
Tssr5584 X 7412744 to 7412747 3 - TSS region transcription start site region 5584
Tssr162782 X 7412756 to 7412772 16 - TSS region transcription start site region 162782
Tssr162783 X 7412774 to 7412788 14 - TSS region transcription start site region 162783
Tssr162784 X 7421039 to 7421085 46 - TSS region transcription start site region 162784
Tssr162785 X 7421087 to 7421121 34 - TSS region transcription start site region 162785
Tssr162786 X 7421123 to 7421132 9 - TSS region transcription start site region 162786
Dbts2 X 151324042 to 7360056 -143963986 QTL diabetes 2