Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:71070975-71711145

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Obq6 X 51683498 to 71391145 19707647 QTL obesity QTL 6
Mamld1 X 71050256 to 71156056 105800 + protein coding gene mastermind-like domain containing 1
Tssr161158 X 71079939 to 71079946 7 + TSS region transcription start site region 161158
Tssr161159 X 71118680 to 71118683 3 + TSS region transcription start site region 161159
Tssr161160 X 71118941 to 71118950 9 + TSS region transcription start site region 161160
n-R5s8 X 71131237 to 71131354 117 + rRNA gene nuclear encoded rRNA 5S 8
Gm14730 X 71197127 to 71198171 1044 + pseudogene predicted gene 14730
Mtm1 X 71210767 to 71315413 104646 + protein coding gene X-linked myotubular myopathy gene 1
Cpgi22754 X 71214981 to 71215202 221 CpG island CpG island 22754
Tssr161161 X 71215021 to 71215063 42 + TSS region transcription start site region 161161
Tssr161162 X 71215068 to 71215079 11 + TSS region transcription start site region 161162
Tssr163527 X 71215522 to 71215555 33 - TSS region transcription start site region 163527
Cpgi22755 X 71364532 to 71365307 775 CpG island CpG island 22755
Tssr161163 X 71364745 to 71364794 49 + TSS region transcription start site region 161163
Mtmr1 X 71364760 to 71419196 54436 + protein coding gene myotubularin related protein 1
Tssr161164 X 71364901 to 71364920 19 + TSS region transcription start site region 161164
DXMit25 X 71390975 to 71391145 170 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 25
Cd99l2 X 71420060 to 71492849 72789 - protein coding gene CD99 antigen-like 2
Gm16189 X 71439714 to 71469851 30137 + antisense lncRNA gene predicted gene 16189
Cpgi22756 X 71492556 to 71492806 250 CpG island CpG island 22756
Tssr163528 X 71492592 to 71492658 66 - TSS region transcription start site region 163528
Tssr163529 X 71492799 to 71492860 61 - TSS region transcription start site region 163529
Gm8421 X 71498372 to 71498676 304 - pseudogene predicted gene 8421
Gm23945 X 71531285 to 71531376 91 - miRNA gene predicted gene, 23945
Cpgi22757 X 71555609 to 71557331 1722 CpG island CpG island 22757
Hmgb3 X 71555917 to 71560673 4756 + protein coding gene high mobility group box 3
Tssr161165 X 71555979 to 71556022 43 + TSS region transcription start site region 161165
Tssr161166 X 71556025 to 71556041 16 + TSS region transcription start site region 161166
Tssr161167 X 71556064 to 71556071 7 + TSS region transcription start site region 161167
Tssr161168 X 71556309 to 71556342 33 + TSS region transcription start site region 161168
Tssr161169 X 71556874 to 71556904 30 + TSS region transcription start site region 161169
Tssr161170 X 71575755 to 71575798 43 + TSS region transcription start site region 161170
Tssr161171 X 71638572 to 71638577 5 + TSS region transcription start site region 161171
Tssr161172 X 71663665 to 71663671 6 + TSS region transcription start site region 161172
Gpr50 X 71663667 to 71669257 5590 + protein coding gene G-protein-coupled receptor 50
Cpgi22758 X 71663824 to 71664920 1096 CpG island CpG island 22758