Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Obq6 | X | 19707647 | QTL | obesity QTL 6 | ||
Aff2 | X | 507743 | + | protein coding gene | AF4/FMR2 family, member 2 | |
Tssr5629 | X | 2 | + | TSS region | transcription start site region 5629 | |
DXMit142 | X | 326 | DNA segment | DNA segment, Chr X, Massachusetts Institute of Technology 142 | ||
1700111N16Rik | X | 214328 | - | antisense lncRNA gene | RIKEN cDNA 1700111N16 gene | |
Tssr5630 | X | 10 | + | TSS region | transcription start site region 5630 | |
1700020N15Rik | X | 678 | + | protein coding gene | RIKEN cDNA 1700020N15 gene | |
Tssr163511 | X | 17 | - | TSS region | transcription start site region 163511 | |
Tssr161152 | X | 2 | + | TSS region | transcription start site region 161152 | |
Ids | X | 22015 | - | protein coding gene | iduronate 2-sulfatase | |
Tssr163512 | X | 11 | - | TSS region | transcription start site region 163512 | |
Tssr163513 | X | 25 | - | TSS region | transcription start site region 163513 | |
Tssr163514 | X | 21 | - | TSS region | transcription start site region 163514 | |
Tssr163515 | X | 10 | - | TSS region | transcription start site region 163515 | |
Tssr163516 | X | 63 | - | TSS region | transcription start site region 163516 | |
Tssr163517 | X | 44 | - | TSS region | transcription start site region 163517 | |
Tssr163518 | X | 33 | - | TSS region | transcription start site region 163518 | |
Tssr163519 | X | 30 | - | TSS region | transcription start site region 163519 | |
Cpgi22751 | X | 345 | CpG island | CpG island 22751 | ||
Tssr163520 | X | 9 | - | TSS region | transcription start site region 163520 | |
Tssr163521 | X | 22 | - | TSS region | transcription start site region 163521 | |
Tssr163522 | X | 60 | - | TSS region | transcription start site region 163522 | |
Tssr163523 | X | 25 | - | TSS region | transcription start site region 163523 | |
Tssr161153 | X | 74 | + | TSS region | transcription start site region 161153 | |
1110012L19Rik | X | 3503 | + | protein coding gene | RIKEN cDNA 1110012L19 gene | |
Tssr161154 | X | 16 | + | TSS region | transcription start site region 161154 | |
4930567H17Rik | X | 839 | - | protein coding gene | RIKEN cDNA 4930567H17 gene | |
Gm16407 | X | 566 | + | pseudogene | predicted pseudogene 16407 | |
Gm14704 | X | 758 | - | pseudogene | predicted gene 14704 | |
Gm6823 | X | 1735 | - | pseudogene | predicted gene 6823 | |
Gm16441 | X | 923 | - | pseudogene | predicted pseudogene 16441 | |
Gm14722 | X | 555 | - | pseudogene | predicted gene 14722 | |
Gm14721 | X | 524 | - | pseudogene | predicted gene 14721 | |
Tmem185a | X | 17427 | - | protein coding gene | transmembrane protein 185A | |
Cpgi22752 | X | 497 | CpG island | CpG island 22752 | ||
Tssr163524 | X | 61 | - | TSS region | transcription start site region 163524 | |
Tssr163525 | X | 27 | - | TSS region | transcription start site region 163525 | |
Gm14727 | X | 524 | + | pseudogene | predicted gene 14727 | |
Gm14729 | X | 561 | + | pseudogene | predicted gene 14729 | |
Gm6038 | X | 947 | + | pseudogene | predicted pseudogene 6038 | |
Gm8401 | X | 1735 | + | pseudogene | predicted gene 8401 | |
Gm14726 | X | 770 | + | pseudogene | predicted gene 14726 | |
Gm14724 | X | 536 | - | pseudogene | predicted gene 14724 | |
Gm14725 | X | 827 | + | pseudogene | predicted gene 14725 | |
Gm14728 | X | 491 | - | pseudogene | predicted gene 14728 | |
Gm46679 | X | 1862 | + | lncRNA gene | predicted gene, 46679 | |
Gm14732 | X | 544 | - | pseudogene | predicted gene 14732 | |
Gm14731 | X | 375 | - | pseudogene | predicted gene 14731 | |
Tssr5631 | X | 3 | + | TSS region | transcription start site region 5631 | |
Rplp1-ps1 | X | 344 | - | pseudogene | ribosomal protein, large, P1, pseudogene 1 | |
Gm22785 | X | 131 | + | snoRNA gene | predicted gene, 22785 | |
Gm8410 | X | 604 | + | pseudogene | predicted gene 8410 | |
Tssr163526 | X | 3 | - | TSS region | transcription start site region 163526 | |
Gm6062 | X | 630 | + | pseudogene | predicted gene 6062 | |
Gm38595 | X | 7515 | + | lncRNA gene | predicted gene, 38595 | |
Cpgi22753 | X | 639 | CpG island | CpG island 22753 | ||
Tssr161155 | X | 60 | + | TSS region | transcription start site region 161155 | |
Tssr161156 | X | 18 | + | TSS region | transcription start site region 161156 | |
Tssr161157 | X | 11 | + | TSS region | transcription start site region 161157 | |
Mamld1 | X | 105800 | + | protein coding gene | mastermind-like domain containing 1 | |
DXMit120 | X | 112 | DNA segment | DNA segment, Chr X, Massachusetts Institute of Technology 120 | ||
Tssr161158 | X | 7 | + | TSS region | transcription start site region 161158 | |
Tssr161159 | X | 3 | + | TSS region | transcription start site region 161159 | |
Tssr161160 | X | 9 | + | TSS region | transcription start site region 161160 | |
n-R5s8 | X | 117 | + | rRNA gene | nuclear encoded rRNA 5S 8 | |
Gm14730 | X | 1044 | + | pseudogene | predicted gene 14730 | |
Mtm1 | X | 104646 | + | protein coding gene | X-linked myotubular myopathy gene 1 | |
Cpgi22754 | X | 221 | CpG island | CpG island 22754 | ||
Tssr161161 | X | 42 | + | TSS region | transcription start site region 161161 | |
Tssr161162 | X | 11 | + | TSS region | transcription start site region 161162 | |
Tssr163527 | X | 33 | - | TSS region | transcription start site region 163527 | |
Cpgi22755 | X | 775 | CpG island | CpG island 22755 | ||
Tssr161163 | X | 49 | + | TSS region | transcription start site region 161163 | |
Mtmr1 | X | 54436 | + | protein coding gene | myotubularin related protein 1 | |
Tssr161164 | X | 19 | + | TSS region | transcription start site region 161164 | |
DXMit25 | X | 170 | DNA segment | DNA segment, Chr X, Massachusetts Institute of Technology 25 | ||
Cd99l2 | X | 72789 | - | protein coding gene | CD99 antigen-like 2 | |
Gm16189 | X | 30137 | + | antisense lncRNA gene | predicted gene 16189 | |
Cpgi22756 | X | 250 | CpG island | CpG island 22756 | ||
Tssr163528 | X | 66 | - | TSS region | transcription start site region 163528 | |
Tssr163529 | X | 61 | - | TSS region | transcription start site region 163529 | |
Gm8421 | X | 304 | - | pseudogene | predicted gene 8421 | |
Gm23945 | X | 91 | - | miRNA gene | predicted gene, 23945 | |
Cpgi22757 | X | 1722 | CpG island | CpG island 22757 | ||
Hmgb3 | X | 4756 | + | protein coding gene | high mobility group box 3 | |
Tssr161165 | X | 43 | + | TSS region | transcription start site region 161165 | |
Tssr161166 | X | 16 | + | TSS region | transcription start site region 161166 | |
Tssr161167 | X | 7 | + | TSS region | transcription start site region 161167 | |
Tssr161168 | X | 33 | + | TSS region | transcription start site region 161168 | |
Tssr161169 | X | 30 | + | TSS region | transcription start site region 161169 | |
Tssr161170 | X | 43 | + | TSS region | transcription start site region 161170 | |
Tssr161171 | X | 5 | + | TSS region | transcription start site region 161171 | |
Tssr161172 | X | 6 | + | TSS region | transcription start site region 161172 | |
Gpr50 | X | 5590 | + | protein coding gene | G-protein-coupled receptor 50 | |
Cpgi22758 | X | 1096 | CpG island | CpG island 22758 | ||
Gm14723 | X | 214 | + | pseudogene | predicted gene 14723 | |
Tssr161173 | X | 4 | + | TSS region | transcription start site region 161173 | |
Rpl30-ps10 | X | 346 | + | pseudogene | ribosomal protein L30, pseudogene 10 | |
Vma21 | X | 11953 | + | protein coding gene | VMA21 vacuolar H+-ATPase homolog (S. cerevisiae) | |
Tssr161174 | X | 21 | + | TSS region | transcription start site region 161174 | |
Tssr161175 | X | 7 | + | TSS region | transcription start site region 161175 | |
Tssr161176 | X | 11 | + | TSS region | transcription start site region 161176 | |
Tssr161177 | X | 9 | + | TSS region | transcription start site region 161177 | |
Tssr161178 | X | 55 | + | TSS region | transcription start site region 161178 | |
Cpgi22759 | X | 775 | CpG island | CpG island 22759 | ||
Tssr163530 | X | 16 | - | TSS region | transcription start site region 163530 | |
Tssr161179 | X | 9 | + | TSS region | transcription start site region 161179 | |
Tssr161180 | X | 41 | + | TSS region | transcription start site region 161180 | |
Tssr161181 | X | 9 | + | TSS region | transcription start site region 161181 | |
Tssr161182 | X | 39 | + | TSS region | transcription start site region 161182 | |
Tssr161183 | X | 11 | + | TSS region | transcription start site region 161183 | |
Gm1141 | X | 8433 | + | protein coding gene | predicted gene 1141 | |
Cpgi22760 | X | 985 | CpG island | CpG island 22760 | ||
Tssr5632 | X | 33 | + | TSS region | transcription start site region 5632 | |
Prrg3 | X | 10098 | + | protein coding gene | proline rich Gla (G-carboxyglutamic acid) 3 (transmembrane) | |
Tssr161184 | X | 13 | + | TSS region | transcription start site region 161184 | |
Tssr161185 | X | 42 | + | TSS region | transcription start site region 161185 | |
Fate1 | X | 16060 | + | protein coding gene | fetal and adult testis expressed 1 | |
Cnga2 | X | 18369 | + | protein coding gene | cyclic nucleotide gated channel alpha 2 | |
DXMit94 | X | 106 | DNA segment | DNA segment, Chr X, Massachusetts Institute of Technology 94 | ||
Gm39519 | X | 1950 | + | lncRNA gene | predicted gene, 39519 | |
Magea4 | X | 947 | + | protein coding gene | melanoma antigen, family A, 4 | |
Gm47265 | X | 1517 | + | pseudogene | predicted gene, 47265 | |
Gabre | X | 17896 | - | protein coding gene | gamma-aminobutyric acid (GABA) A receptor, subunit epsilon | |
Mir224 | X | 81 | - | miRNA gene | microRNA 224 | |
Mir452 | X | 84 | - | miRNA gene | microRNA 452 | |
Tssr163531 | X | 10 | - | TSS region | transcription start site region 163531 | |
Cpgi22761 | X | 155 | CpG island | CpG island 22761 | ||
DXBay14 | X | 183 | DNA segment | DNA segment, Chr X, Baylor 14 | ||
Magea10 | X | 4988 | - | protein coding gene | melanoma antigen family A, 10 | |
DXMit119 | X | 145 | DNA segment | DNA segment, Chr X, Massachusetts Institute of Technology 119 | ||
Hstx1 | X | 6146960 | QTL | hybrid sterility, X Chromosome QTL 1 | ||
Gabra3 | X | 224167 | - | protein coding gene | gamma-aminobutyric acid (GABA) A receptor, subunit alpha 3 | |
Gm14735 | X | 3087 | + | pseudogene | predicted gene 14735 | |
DXMit210 | X | 110 | DNA segment | DNA Segment, Chr X Massachusetts Institute of Technology 210 | ||
Mir767 | X | 106 | - | miRNA gene | microRNA 767 | |
Mir105 | X | 79 | - | miRNA gene | microRNA 105 | |
Gm23461 | X | 106 | + | snRNA gene | predicted gene, 23461 | |
Tssr163532 | X | 64 | - | TSS region | transcription start site region 163532 | |
Desp5 | X | 0 | QTL | despair 5 | ||
Gm14736 | X | 335 | - | pseudogene | predicted gene 14736 | |
Cpgi22762 | X | 495 | CpG island | CpG island 22762 | ||
Tssr161186 | X | 22 | + | TSS region | transcription start site region 161186 | |
Gabrq | X | 17424 | + | protein coding gene | gamma-aminobutyric acid (GABA) A receptor, subunit theta | |
Tssr161187 | X | 23 | + | TSS region | transcription start site region 161187 | |
Magea9-ps | X | 656 | + | pseudogene | melanoma antigen, family A, 9, pseudogene | |
Cetn2 | X | 4779 | - | protein coding gene | centrin 2 | |
Cpgi22763 | X | 447 | CpG island | CpG island 22763 | ||
Tssr163533 | X | 68 | - | TSS region | transcription start site region 163533 | |
Tssr163534 | X | 11 | - | TSS region | transcription start site region 163534 | |
Tssr163535 | X | 11 | - | TSS region | transcription start site region 163535 | |
Nsdhl | X | 39957 | + | protein coding gene | NAD(P) dependent steroid dehydrogenase-like | |
Tssr161188 | X | 30 | + | TSS region | transcription start site region 161188 | |
Tssr161189 | X | 21 | + | TSS region | transcription start site region 161189 | |
Tssr161190 | X | 13 | + | TSS region | transcription start site region 161190 | |
Tssr161191 | X | 8 | + | TSS region | transcription start site region 161191 | |
Gm14684 | X | 521 | + | lincRNA gene | predicted gene 14684 | |
Cpgi22764 | X | 524 | CpG island | CpG island 22764 | ||
Zfp185 | X | 44204 | + | protein coding gene | zinc finger protein 185 | |
Tssr161192 | X | 14 | + | TSS region | transcription start site region 161192 | |
Mir2137 | X | 65 | + | miRNA gene | microRNA 2137 | |
Tssr161193 | X | 7 | + | TSS region | transcription start site region 161193 | |
Tssr161194 | X | 7 | + | TSS region | transcription start site region 161194 | |
Tssr161195 | X | 7 | + | TSS region | transcription start site region 161195 | |
DXMit1.2 | X | 105 | DNA segment | DNA segment, Chr X, Massachusetts Institute of Technology 1.2 | ||
DXMit1.1 | X | 97 | DNA segment | DNA segment, Chr X, Massachusetts Institute of Technology 1.1 | ||
Pnma5 | X | 3122 | - | protein coding gene | paraneoplastic antigen family 5 | |
Tssr163536 | X | 13 | - | TSS region | transcription start site region 163536 | |
Gm6858 | X | 679 | + | pseudogene | predicted gene 6858 | |
Tssr161196 | X | 22 | + | TSS region | transcription start site region 161196 | |
Pnma3 | X | 3404 | + | protein coding gene | paraneoplastic antigen MA3 | |
Xlr4a | X | 8133 | - | protein coding gene | X-linked lymphocyte-regulated 4A | |
Tssr163537 | X | 23 | - | TSS region | transcription start site region 163537 | |
Xlr3a | X | 10802 | - | protein coding gene | X-linked lymphocyte-regulated 3A | |
Gm20455 | X | 7699 | + | unclassified non-coding RNA gene | predicted gene 20455 | |
Xlr5a | X | 11492 | - | protein coding gene | X-linked lymphocyte-regulated 5A | |
Gm14685 | X | 12215 | + | protein coding gene | predicted gene 14685 | |
DXBay18 | X | 12218 | - | protein coding gene | DNA segment, Chr X, Baylor 18 | |
Xlr5b | X | 10076 | + | protein coding gene | X-linked lymphocyte-regulated 5B | |
Spin2d | X | 1687 | - | protein coding gene | spindlin family, member 2D | |
Xlr3b | X | 10723 | + | protein coding gene | X-linked lymphocyte-regulated 3B | |
Xlr4b | X | 8120 | + | protein coding gene | X-linked lymphocyte-regulated 4B | |
Cpgi22765 | X | 1145 | CpG island | CpG island 22765 | ||
Tssr161197 | X | 42 | + | TSS region | transcription start site region 161197 | |
F8a | X | 2489 | + | protein coding gene | factor 8-associated gene A | |
DXMit146a | X | 147 | DNA segment | DNA segment, Chr X, Massachusetts Institute of Technology 146a | ||
Xlr4c | X | 9054 | - | protein coding gene | X-linked lymphocyte-regulated 4C | |
Tssr163538 | X | 40 | - | TSS region | transcription start site region 163538 | |
Xlr3c | X | 10850 | - | protein coding gene | X-linked lymphocyte-regulated 3C | |
Xlr5c | X | 10080 | - | protein coding gene | X-linked lymphocyte-regulated 5C | |
Gm5639 | X | 2369 | + | pseudogene | predicted pseudogene 5639 | |
Gm8501 | X | 431 | + | pseudogene | predicted gene 8501 | |
Gm32150 | X | 12957 | - | lncRNA gene | predicted gene, 32150 | |
Shm4 | X | -29990670 | QTL | sperm head morphology 4 | ||
Mhysq2 | X | -67892217 | QTL | male hybrid sterility QTL 2 |