Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:68760294-70468037

Filter by:
56 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hstx2 X 64880641 to 69581094 4700453 QTL hybrid sterility, X Chromosome QTL 2
Tssr161145 X 68761839 to 68761873 34 + TSS region transcription start site region 161145
Fmr1nb X 68761839 to 68804561 42722 + protein coding gene Fmr1 neighbor
Tssr161146 X 68761875 to 68761887 12 + TSS region transcription start site region 161146
Tssr161147 X 68761890 to 68761901 11 + TSS region transcription start site region 161147
Gm14699 X 68782640 to 68782867 227 - pseudogene predicted gene 14699
Gm14698 X 68821093 to 68825318 4225 + protein coding gene predicted gene 14698
Cpgi22749 X 68821182 to 68821406 224 CpG island CpG island 22749
Gm6812 X 68892375 to 68893053 678 - protein coding gene predicted gene 6812
Gm8344 X 68921157 to 68922012 855 - pseudogene predicted gene 8344
n-R5s7 X 68949564 to 68949684 120 - rRNA gene nuclear encoded rRNA 5S 7
Gm14705 X 69356596 to 69361269 4673 - antisense lncRNA gene predicted gene 14705
Cpgi22750 X 69359830 to 69361241 1411 CpG island CpG island 22750
Aff2 X 69360294 to 69868037 507743 + protein coding gene AF4/FMR2 family, member 2
Tssr161148 X 69360306 to 69360387 81 + TSS region transcription start site region 161148
Tssr161149 X 69360394 to 69360411 17 + TSS region transcription start site region 161149
Tssr161150 X 69390427 to 69390433 6 + TSS region transcription start site region 161150
2610007B07Rik X 69409225 to 69411189 1964 unclassified gene RIKEN cDNA 2610007B07 gene
Tssr161151 X 69415312 to 69415339 27 + TSS region transcription start site region 161151
DXMit110 X 69587863 to 69587995 132 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 110
Gm8172 X 69605496 to 69606245 749 - pseudogene predicted pseudogene 8172
Tssr163510 X 69606287 to 69606293 6 - TSS region transcription start site region 163510
DXMit109 X 69674903 to 69675052 149 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 109
DXMit194 X 69713595 to 69713714 119 DNA segment DNA Segment, Chr X, Massachusetts Institute of Technology 194
Tssr5629 X 69853631 to 69853633 2 + TSS region transcription start site region 5629
DXMit142 X 69854278 to 69854604 326 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 142
1700111N16Rik X 69929260 to 70143588 214328 - antisense lncRNA gene RIKEN cDNA 1700111N16 gene
Tssr5630 X 69945298 to 69945308 10 + TSS region transcription start site region 5630
1700020N15Rik X 69945300 to 69945978 678 + protein coding gene RIKEN cDNA 1700020N15 gene
Tssr163511 X 70143574 to 70143591 17 - TSS region transcription start site region 163511
Tssr161152 X 70184659 to 70184661 2 + TSS region transcription start site region 161152
Ids X 70343069 to 70365084 22015 - protein coding gene iduronate 2-sulfatase
Tssr163512 X 70344274 to 70344285 11 - TSS region transcription start site region 163512
Tssr163513 X 70344286 to 70344311 25 - TSS region transcription start site region 163513
Tssr163514 X 70344356 to 70344377 21 - TSS region transcription start site region 163514
Tssr163515 X 70344638 to 70344648 10 - TSS region transcription start site region 163515
Tssr163516 X 70344857 to 70344920 63 - TSS region transcription start site region 163516
Tssr163517 X 70344944 to 70344988 44 - TSS region transcription start site region 163517
Tssr163518 X 70345252 to 70345285 33 - TSS region transcription start site region 163518
Tssr163519 X 70346154 to 70346184 30 - TSS region transcription start site region 163519
Cpgi22751 X 70364868 to 70365213 345 CpG island CpG island 22751
Tssr163520 X 70364928 to 70364937 9 - TSS region transcription start site region 163520
Tssr163521 X 70365020 to 70365042 22 - TSS region transcription start site region 163521
Tssr163522 X 70365052 to 70365112 60 - TSS region transcription start site region 163522
Tssr163523 X 70385813 to 70385838 25 - TSS region transcription start site region 163523
Tssr161153 X 70385870 to 70385944 74 + TSS region transcription start site region 161153
1110012L19Rik X 70385913 to 70389416 3503 + protein coding gene RIKEN cDNA 1110012L19 gene
Tssr161154 X 70385947 to 70385963 16 + TSS region transcription start site region 161154
4930567H17Rik X 70393901 to 70394740 839 - protein coding gene RIKEN cDNA 4930567H17 gene
Gm16407 X 70400497 to 70401063 566 + pseudogene predicted pseudogene 16407
Gm14704 X 70403184 to 70403942 758 - pseudogene predicted gene 14704
Gm6823 X 70420719 to 70422454 1735 - pseudogene predicted gene 6823
Gm16441 X 70426311 to 70427234 923 - pseudogene predicted pseudogene 16441
Gm14722 X 70432437 to 70432992 555 - pseudogene predicted gene 14722
Gm14721 X 70436409 to 70436933 524 - pseudogene predicted gene 14721
Tmem185a X 70459753 to 70477180 17427 - protein coding gene transmembrane protein 185A