Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:66461161-67291167

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
DXMit87 X 66647307 to 66647452 145 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 87
Slitrk2 X 66649318 to 66661393 12075 + protein coding gene SLIT and NTRK-like family, member 2
Tssr161127 X 66649376 to 66649394 18 + TSS region transcription start site region 161127
Tssr161128 X 66649436 to 66649447 11 + TSS region transcription start site region 161128
Tssr161129 X 66653003 to 66653031 28 + TSS region transcription start site region 161129
Tssr161130 X 66653037 to 66653045 8 + TSS region transcription start site region 161130
Tssr161131 X 66656911 to 66656916 5 + TSS region transcription start site region 161131
Gm23000 X 66728415 to 66728553 138 + snRNA gene predicted gene, 23000
Gm8310 X 66763676 to 66764771 1095 + pseudogene predicted gene 8310
Mirc50 X 66776757 to 66777332 575 complex/cluster/region microRNA cluster 50, including Mir743a through Mir743b
Mir743 X 66776757 to 66776818 61 - miRNA gene microRNA 743
Mir743b X 66777256 to 66777332 76 - miRNA gene microRNA 743b
Gm14681 X 66778442 to 66778852 410 - pseudogene predicted gene 14681
Tssr161132 X 66778764 to 66778790 26 + TSS region transcription start site region 161132
Tssr163506 X 66778801 to 66778833 32 - TSS region transcription start site region 163506
Mir742 X 66780373 to 66780437 64 - miRNA gene microRNA 742
Mir883a X 66780758 to 66780833 75 - miRNA gene microRNA 883a
Mirc52 X 66780758 to 66789967 9209 complex/cluster/region microRNA cluster 52, including Mir883a through Mir883b
Mir883b X 66789890 to 66789967 77 - miRNA gene microRNA 883b
Mir471 X 66792595 to 66792661 66 - miRNA gene microRNA 471
Mir741 X 66796805 to 66796875 70 - miRNA gene microRNA 741
Mir463 X 66799223 to 66799297 74 - miRNA gene microRNA 463
Mir880 X 66800530 to 66800607 77 - miRNA gene microRNA 880
Mir878 X 66801508 to 66801585 77 - miRNA gene microRNA 878
Mir881 X 66801944 to 66802021 77 - miRNA gene microRNA 881
Mir871 X 66810428 to 66810504 76 - miRNA gene microRNA 871
Mirc51 X 66810428 to 66814025 3597 complex/cluster/region microRNA cluster 51, including Mir871 through Mir470
Mir470 X 66813951 to 66814025 74 - miRNA gene microRNA 470
Mir465d X 66822656 to 66822713 57 - miRNA gene microRNA 465d
Mir465c-1 X 66825955 to 66826035 80 - miRNA gene microRNA 465c-1
Mir465b-1 X 66829202 to 66829280 78 - miRNA gene microRNA 465b-1
Mir465c-2 X 66832517 to 66832597 80 - miRNA gene microRNA 465c-2
Mir465b-2 X 66835764 to 66835842 78 - miRNA gene microRNA 465b-2
Mir465 X 66839052 to 66839125 73 - miRNA gene microRNA 465
Gm30993 X 66850419 to 66852904 2485 - lncRNA gene predicted gene, 30993
Tssr163507 X 66876161 to 66876167 6 - TSS region transcription start site region 163507
DXMit74 X 66938963 to 66939100 137 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 74
Gm6783 X 66969230 to 66970659 1429 - pseudogene predicted gene 6783
Gm14682 X 66972655 to 66973174 519 + pseudogene predicted gene 14682
Gm8312 X 67169613 to 67170230 617 - pseudogene predicted gene 8312