Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:60642025-61142057

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
DXMit92 X 60689879 to 60690024 145 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 92
Gm4909 X 60706270 to 60707063 793 - pseudogene predicted gene 4909
Gm8163 X 60726389 to 60727448 1059 - pseudogene predicted gene 8163
Tssr163493 X 60727489 to 60727501 12 - TSS region transcription start site region 163493
Gm14661 X 60799436 to 60808323 8887 + antisense lncRNA gene predicted gene 14661
Gm14660 X 60818208 to 60818782 574 + pseudogene predicted gene 14660
Sox3 X 60891366 to 60893430 2064 - protein coding gene SRY (sex determining region Y)-box 3
Tssr163494 X 60891702 to 60891719 17 - TSS region transcription start site region 163494
Cpgi22744 X 60891802 to 60894753 2951 CpG island CpG island 22744
Tssr163495 X 60892025 to 60892057 32 - TSS region transcription start site region 163495
Tssr5624 X 60892518 to 60892567 49 - TSS region transcription start site region 5624
Tssr163496 X 60892676 to 60892690 14 - TSS region transcription start site region 163496
Tssr163497 X 60893437 to 60893440 3 - TSS region transcription start site region 163497
Gm14662 X 60893653 to 60898067 4414 + antisense lncRNA gene predicted gene 14662
Gm38438 X 60893764 to 61076111 182347 + lncRNA gene predicted gene, 38438
Gm7076 X 60906712 to 60907167 455 - pseudogene predicted pseudogene 7076
Rpl7l1-ps1 X 60971990 to 60972714 724 - pseudogene ribosomal protein L7-like 1, pseudogene 1
Gm14664 X 61041741 to 61076068 34327 + lincRNA gene predicted gene 14664
Tssr5625 X 61075361 to 61075384 23 + TSS region transcription start site region 5625
Gm14663 X 61090582 to 61091734 1152 + pseudogene predicted gene 14663
Tssr161068 X 61116359 to 61116397 38 + TSS region transcription start site region 161068
C230004F18Rik X 61116378 to 61139460 23082 + lincRNA gene RIKEN cDNA C230004F18 gene
Tssr161069 X 61120295 to 61120310 15 + TSS region transcription start site region 161069
Tssr161070 X 61120488 to 61120499 11 + TSS region transcription start site region 161070
Tssr161071 X 61120503 to 61120523 20 + TSS region transcription start site region 161071
Tssr161072 X 61120822 to 61120843 21 + TSS region transcription start site region 161072
Tssr5626 X 61123542 to 61123546 4 + TSS region transcription start site region 5626
Tssr161073 X 61127951 to 61127960 9 + TSS region transcription start site region 161073
Tssr161074 X 61127966 to 61127979 13 + TSS region transcription start site region 161074
Tssr161075 X 61128000 to 61128009 9 + TSS region transcription start site region 161075