Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:59551700-60182222

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lgth13 X 12000000 to 60000000 48000000 QTL body length 13
Wght11 X 12000000 to 60000000 48000000 QTL weight 11
Fgf13 X 59062145 to 59568071 505926 - protein coding gene fibroblast growth factor 13
Cpgi22739 X 59566858 to 59568279 1421 CpG island CpG island 22739
Tssr163472 X 59567348 to 59567368 20 - TSS region transcription start site region 163472
Tssr163473 X 59568056 to 59568067 11 - TSS region transcription start site region 163473
Tssr163474 X 59568068 to 59568094 26 - TSS region transcription start site region 163474
Tssr163475 X 59568102 to 59568130 28 - TSS region transcription start site region 163475
Tssr163476 X 59585670 to 59585687 17 - TSS region transcription start site region 163476
Tssr161064 X 59589283 to 59589294 11 + TSS region transcription start site region 161064
Gm36631 X 59589288 to 59692078 102790 + lncRNA gene predicted gene, 36631
Bdln1 X 59656746 to 59656858 112 QTL body length 1
DXMit73 X 59656746 to 59656858 112 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 73
Gm44500 X 59693450 to 59693549 99 - miRNA gene predicted gene, 44500
Gm44318 X 59854661 to 59854729 68 + miRNA gene predicted gene, 44318
Gm14887 X 59866700 to 59867222 522 - pseudogene predicted gene 14887
Tssr161065 X 59999436 to 59999495 59 + TSS region transcription start site region 161065
F9 X 59999464 to 60030759 31295 + protein coding gene coagulation factor IX
Tssr161066 X 60030532 to 60030559 27 + TSS region transcription start site region 161066
Gm5637 X 60045111 to 60046229 1118 - pseudogene predicted pseudogene 5637
Tssr163477 X 60045155 to 60045176 21 - TSS region transcription start site region 163477
Tssr161067 X 60050902 to 60050938 36 + TSS region transcription start site region 161067
Gm14891 X 60051001 to 60051596 595 + pseudogene predicted gene 14891
Mcf2 X 60055956 to 60179089 123133 - protein coding gene mcf.2 transforming sequence
Tssr163478 X 60147671 to 60147680 9 - TSS region transcription start site region 163478
Tssr163479 X 60147836 to 60147870 34 - TSS region transcription start site region 163479
Tssr163480 X 60147885 to 60147894 9 - TSS region transcription start site region 163480
Tssr163481 X 60147895 to 60147902 7 - TSS region transcription start site region 163481
Tssr163482 X 60178254 to 60178266 12 - TSS region transcription start site region 163482
Cpgi22740 X 60178564 to 60178866 302 CpG island CpG island 22740
Tssr163483 X 60179140 to 60179181 41 - TSS region transcription start site region 163483