MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region X:5867097-6297701

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm14451	X	5869686 to 5871458	1772	-	pseudogene	predicted gene 14451
Gm14448	X	5885743 to 5885952	209	-	pseudogene	predicted gene 14448
Tssr160355	X	5984669 to 5984710	41	+	TSS region	transcription start site region 160355
Gm14450	X	5984772 to 5985011	239	+	pseudogene	predicted gene 14450
Gm26618	X	6027056 to 6092269	65213	-	sense overlapping lncRNA gene	predicted gene, 26618
Nudt11	X	6047507 to 6054751	7244	+	protein coding gene	nudix (nucleoside diphosphate linked moiety X)-type motif 11
Rpl19-ps12	X	6071222 to 6071812	590	+	pseudogene	ribosomal protein L19, pseudogene 12
Gm27360	X	6071478 to 6071557	79	+	miRNA gene	predicted gene, 27360
AU022751	X	6081219 to 6083419	2200	-	protein coding gene	expressed sequence AU022751
Cpgi22560	X	6082097 to 6082701	604		CpG island	CpG island 22560
Cpgi22561	X	6082962 to 6083432	470		CpG island	CpG island 22561
Tssr162767	X	6083415 to 6083423	8	-	TSS region	transcription start site region 162767
Cpgi22562	X	6092111 to 6092368	257		CpG island	CpG island 22562
Gm33733	X	6092424 to 6229711	137287	+	lncRNA gene	predicted gene, 33733
DXMit101	X	6106713 to 6106833	120		DNA segment	DNA segment, Chr X, Massachusetts Institute of Technology 101
n-R5s2	X	6106891 to 6107009	118	+	rRNA gene	nuclear encoded rRNA 5S 2
Nudt10	X	6168696 to 6173015	4319	-	protein coding gene	nudix (nucleoside diphosphate linked moiety X)-type motif 10
Tssr162768	X	6171827 to 6171832	5	-	TSS region	transcription start site region 162768
Gm46685	X	6238400 to 6241113	2713	+	lncRNA gene	predicted gene, 46685