Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:58422658-59772736

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44 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm14645 X 58427659 to 58428075 416 - pseudogene predicted gene 14645
44.MMHAP34FRG11 X 58446170 to 58446364 194 DNA segment DNA segment, 44.MMHAP34FRG11
Gm16436 X 58630187 to 58632738 2551 - pseudogene predicted gene 16436
Gm14650 X 58630400 to 58631288 888 - pseudogene predicted gene 14650
Tssr163461 X 58631306 to 58631308 2 - TSS region transcription start site region 163461
Gm7071 X 58709195 to 58709656 461 - pseudogene predicted gene 7071
Gm44333 X 58794731 to 58794837 106 + miRNA gene predicted gene, 44333
Tssr5623 X 58884472 to 58884473 1 - TSS region transcription start site region 5623
4930550L24Rik X 58911461 to 58920304 8843 + protein coding gene RIKEN cDNA 4930550L24 gene
Tssr161061 X 58911472 to 58911488 16 + TSS region transcription start site region 161061
Tssr161062 X 58911503 to 58911513 10 + TSS region transcription start site region 161062
Fgf13 X 59062145 to 59568071 505926 - protein coding gene fibroblast growth factor 13
Tssr163462 X 59062889 to 59062902 13 - TSS region transcription start site region 163462
Gm26351 X 59080891 to 59081122 231 - ribozyme gene predicted gene, 26351
9430082L08Rik X 59092638 to 59093867 1229 unclassified gene RIKEN cDNA 9430082L08 gene
Mir504 X 59097658 to 59097736 78 - miRNA gene microRNA 504
Cpgi22738 X 59133850 to 59134838 988 CpG island CpG island 22738
Tssr163463 X 59134361 to 59134375 14 - TSS region transcription start site region 163463
Tssr163464 X 59134379 to 59134392 13 - TSS region transcription start site region 163464
Tssr163465 X 59134393 to 59134420 27 - TSS region transcription start site region 163465
Tssr163466 X 59134421 to 59134445 24 - TSS region transcription start site region 163466
Tssr163467 X 59134706 to 59134717 11 - TSS region transcription start site region 163467
Tssr163468 X 59134728 to 59134785 57 - TSS region transcription start site region 163468
Tssr163469 X 59166080 to 59166101 21 - TSS region transcription start site region 163469
Gm36570 X 59178629 to 59191608 12979 + lncRNA gene predicted gene, 36570
Tssr161063 X 59179613 to 59179637 24 + TSS region transcription start site region 161063
Gm26487 X 59190773 to 59190866 93 + snRNA gene predicted gene, 26487
Gm14890 X 59196963 to 59197638 675 + pseudogene predicted gene 14890
Gm39518 X 59306935 to 59327018 20083 - lncRNA gene predicted gene, 39518
Rtwq1 X 59431700 to 59431843 143 QTL reduced testis weight QTL 1
DXMit141 X 59431700 to 59431843 143 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 141
Tssr163470 X 59431826 to 59431830 4 - TSS region transcription start site region 163470
Tssr163471 X 59544045 to 59544048 3 - TSS region transcription start site region 163471
Cpgi22739 X 59566858 to 59568279 1421 CpG island CpG island 22739
Tssr163472 X 59567348 to 59567368 20 - TSS region transcription start site region 163472
Tssr163473 X 59568056 to 59568067 11 - TSS region transcription start site region 163473
Tssr163474 X 59568068 to 59568094 26 - TSS region transcription start site region 163474
Tssr163475 X 59568102 to 59568130 28 - TSS region transcription start site region 163475
Tssr163476 X 59585670 to 59585687 17 - TSS region transcription start site region 163476
Tssr161064 X 59589283 to 59589294 11 + TSS region transcription start site region 161064
Gm36631 X 59589288 to 59692078 102790 + lncRNA gene predicted gene, 36631
DXMit73 X 59656746 to 59656858 112 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 73
Bdln1 X 59656746 to 59656858 112 QTL body length 1
Gm44500 X 59693450 to 59693549 99 - miRNA gene predicted gene, 44500