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Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:57894195-59524656

Filter by:
54 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
C81412 X 57897192 to 57897518 326 DNA segment expressed sequence C81412
Tssr161055 X 57920054 to 57920061 7 + TSS region transcription start site region 161055
Gm25023 X 57989473 to 57989579 106 + snRNA gene predicted gene, 25023
AY339874 X 57993709 to 57995654 1945 - pseudogene cDNA sequence AY339874
Tssr161056 X 58019586 to 58019604 18 + TSS region transcription start site region 161056
Zic3 X 58022700 to 58041736 19036 + protein coding gene zinc finger protein of the cerebellum 3
Cpgi22735 X 58030252 to 58030789 537 CpG island CpG island 22735
Tssr161057 X 58030622 to 58030636 14 + TSS region transcription start site region 161057
Tssr161058 X 58030650 to 58030661 11 + TSS region transcription start site region 161058
Tssr161059 X 58030898 to 58030906 8 + TSS region transcription start site region 161059
Tssr161060 X 58031003 to 58031018 15 + TSS region transcription start site region 161060
Cpgi22736 X 58031005 to 58032264 1259 CpG island CpG island 22736
Cpgi22737 X 58038153 to 58039253 1100 CpG island CpG island 22737
Tssr163457 X 58038614 to 58038624 10 - TSS region transcription start site region 163457
Tssr163458 X 58038649 to 58038658 9 - TSS region transcription start site region 163458
Tssr163459 X 58039768 to 58039779 11 - TSS region transcription start site region 163459
Tssr163460 X 58039901 to 58039904 3 - TSS region transcription start site region 163460
Gm36466 X 58121145 to 58127580 6435 + lncRNA gene predicted gene, 36466
Gm36522 X 58135157 to 58177146 41989 + lncRNA gene predicted gene, 36522
Gm14649 X 58184163 to 58184486 323 - pseudogene predicted gene 14649
Gm14647 X 58225085 to 58225755 670 + pseudogene predicted gene 14647
Gm25851 X 58357952 to 58358058 106 - snRNA gene predicted gene, 25851
Gm14645 X 58427659 to 58428075 416 - pseudogene predicted gene 14645
44.MMHAP34FRG11 X 58446170 to 58446364 194 DNA segment DNA segment, 44.MMHAP34FRG11
Gm16436 X 58630187 to 58632738 2551 - pseudogene predicted gene 16436
Gm14650 X 58630400 to 58631288 888 - pseudogene predicted gene 14650
Tssr163461 X 58631306 to 58631308 2 - TSS region transcription start site region 163461
Gm7071 X 58709195 to 58709656 461 - pseudogene predicted gene 7071
Gm44333 X 58794731 to 58794837 106 + miRNA gene predicted gene, 44333
Tssr5623 X 58884472 to 58884473 1 - TSS region transcription start site region 5623
4930550L24Rik X 58911461 to 58920304 8843 + protein coding gene RIKEN cDNA 4930550L24 gene
Tssr161061 X 58911472 to 58911488 16 + TSS region transcription start site region 161061
Tssr161062 X 58911503 to 58911513 10 + TSS region transcription start site region 161062
Fgf13 X 59062145 to 59568071 505926 - protein coding gene fibroblast growth factor 13
Tssr163462 X 59062889 to 59062902 13 - TSS region transcription start site region 163462
Gm26351 X 59080891 to 59081122 231 - ribozyme gene predicted gene, 26351
9430082L08Rik X 59092638 to 59093867 1229 unclassified gene RIKEN cDNA 9430082L08 gene
Mir504 X 59097658 to 59097736 78 - miRNA gene microRNA 504
Cpgi22738 X 59133850 to 59134838 988 CpG island CpG island 22738
Tssr163463 X 59134361 to 59134375 14 - TSS region transcription start site region 163463
Tssr163464 X 59134379 to 59134392 13 - TSS region transcription start site region 163464
Tssr163465 X 59134393 to 59134420 27 - TSS region transcription start site region 163465
Tssr163466 X 59134421 to 59134445 24 - TSS region transcription start site region 163466
Tssr163467 X 59134706 to 59134717 11 - TSS region transcription start site region 163467
Tssr163468 X 59134728 to 59134785 57 - TSS region transcription start site region 163468
Tssr163469 X 59166080 to 59166101 21 - TSS region transcription start site region 163469
Gm36570 X 59178629 to 59191608 12979 + lncRNA gene predicted gene, 36570
Tssr161063 X 59179613 to 59179637 24 + TSS region transcription start site region 161063
Gm26487 X 59190773 to 59190866 93 + snRNA gene predicted gene, 26487
Gm14890 X 59196963 to 59197638 675 + pseudogene predicted gene 14890
Gm39518 X 59306935 to 59327018 20083 - lncRNA gene predicted gene, 39518
DXMit141 X 59431700 to 59431843 143 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 141
Rtwq1 X 59431700 to 59431843 143 QTL reduced testis weight QTL 1
Tssr163470 X 59431826 to 59431830 4 - TSS region transcription start site region 163470