Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:57446861-58086875

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm364 X 57409154 to 57488767 79613 + protein coding gene predicted gene 364
Gpr101 X 57496668 to 57503757 7089 - protein coding gene G protein-coupled receptor 101
Cpgi22734 X 57503364 to 57503944 580 CpG island CpG island 22734
Tssr163456 X 57503733 to 57503741 8 - TSS region transcription start site region 163456
Gm14630 X 57631709 to 57631954 245 - pseudogene predicted gene 14630
Gm5389 X 57659732 to 57660907 1175 + pseudogene predicted gene 5389
Gm14629 X 57670344 to 57670487 143 - pseudogene predicted gene 14629
Gm8107 X 57736730 to 57738540 1810 - pseudogene predicted gene 8107
Gm39516 X 57742398 to 57749951 7553 - lncRNA gene predicted gene, 39516
Gm8111 X 57745317 to 57746303 986 - pseudogene predicted gene 8111
Gm14631 X 57753275 to 57753868 593 - pseudogene predicted gene 14631
Tssr161054 X 57766861 to 57766875 14 + TSS region transcription start site region 161054
AI606141 X 57812770 to 57813179 409 unclassified gene cDNA sequence AI606141
Gm39517 X 57857628 to 57866710 9082 - lncRNA gene predicted gene, 39517
C81412 X 57897192 to 57897518 326 DNA segment expressed sequence C81412
Tssr161055 X 57920054 to 57920061 7 + TSS region transcription start site region 161055
Gm25023 X 57989473 to 57989579 106 + snRNA gene predicted gene, 25023
AY339874 X 57993709 to 57995654 1945 - pseudogene cDNA sequence AY339874
Tssr161056 X 58019586 to 58019604 18 + TSS region transcription start site region 161056
Zic3 X 58022700 to 58041736 19036 + protein coding gene zinc finger protein of the cerebellum 3
Cpgi22735 X 58030252 to 58030789 537 CpG island CpG island 22735
Tssr161057 X 58030622 to 58030636 14 + TSS region transcription start site region 161057
Tssr161058 X 58030650 to 58030661 11 + TSS region transcription start site region 161058
Tssr161059 X 58030898 to 58030906 8 + TSS region transcription start site region 161059
Tssr161060 X 58031003 to 58031018 15 + TSS region transcription start site region 161060
Cpgi22736 X 58031005 to 58032264 1259 CpG island CpG island 22736
Cpgi22737 X 58038153 to 58039253 1100 CpG island CpG island 22737
Tssr163457 X 58038614 to 58038624 10 - TSS region transcription start site region 163457
Tssr163458 X 58038649 to 58038658 9 - TSS region transcription start site region 163458
Tssr163459 X 58039768 to 58039779 11 - TSS region transcription start site region 163459
Tssr163460 X 58039901 to 58039904 3 - TSS region transcription start site region 163460