Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:56664234-57210270

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62 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm39515 X 56682477 to 56684891 2414 + lncRNA gene predicted gene, 39515
Gm36289 X 56720384 to 56723608 3224 - lncRNA gene predicted gene, 36289
Gm26312 X 56725073 to 56725237 164 + snRNA gene predicted gene, 26312
Cpgi22731 X 56731105 to 56732203 1098 CpG island CpG island 22731
Tssr160994 X 56731366 to 56731416 50 + TSS region transcription start site region 160994
Tssr160995 X 56731420 to 56731441 21 + TSS region transcription start site region 160995
Tssr160996 X 56731442 to 56731471 29 + TSS region transcription start site region 160996
Tssr160997 X 56731513 to 56731608 95 + TSS region transcription start site region 160997
Tssr160998 X 56731756 to 56731767 11 + TSS region transcription start site region 160998
Tssr160999 X 56731779 to 56731798 19 + TSS region transcription start site region 160999
Fhl1 X 56731787 to 56793346 61559 + protein coding gene four and a half LIM domains 1
Tssr163424 X 56731873 to 56731875 2 - TSS region transcription start site region 163424
Tssr161000 X 56734811 to 56734817 6 + TSS region transcription start site region 161000
Gm23258 X 56750010 to 56750115 105 + snRNA gene predicted gene, 23258
Tssr161001 X 56779549 to 56779565 16 + TSS region transcription start site region 161001
Tssr161002 X 56779651 to 56779656 5 + TSS region transcription start site region 161002
Tssr161003 X 56779676 to 56779695 19 + TSS region transcription start site region 161003
Tssr161004 X 56779699 to 56779718 19 + TSS region transcription start site region 161004
Tssr161005 X 56786535 to 56786564 29 + TSS region transcription start site region 161005
Tssr161006 X 56787045 to 56787049 4 + TSS region transcription start site region 161006
Tssr161007 X 56787701 to 56787715 14 + TSS region transcription start site region 161007
Tssr161008 X 56787801 to 56787812 11 + TSS region transcription start site region 161008
Tssr161009 X 56787874 to 56787883 9 + TSS region transcription start site region 161009
Tssr161010 X 56792075 to 56792107 32 + TSS region transcription start site region 161010
Tssr161011 X 56792582 to 56792607 25 + TSS region transcription start site region 161011
Tssr161012 X 56792666 to 56792679 13 + TSS region transcription start site region 161012
Tssr161013 X 56792728 to 56792760 32 + TSS region transcription start site region 161013
Map7d3 X 56797858 to 56822326 24468 - protein coding gene MAP7 domain containing 3
Tssr163425 X 56822308 to 56822346 38 - TSS region transcription start site region 163425
Tssr163426 X 56822505 to 56822508 3 - TSS region transcription start site region 163426
Tssr163427 X 56853817 to 56853819 2 - TSS region transcription start site region 163427
Adgrg4 X 56894234 to 56980270 86036 + protein coding gene adhesion G protein-coupled receptor G4
DXMit209 X 56896278 to 56896398 120 DNA segment DNA Segment, Chr X Massachusetts Institute of Technology 209
Brs3 X 57043074 to 57048758 5684 + protein coding gene bombesin-like receptor 3
Cpgi22732 X 57053140 to 57054130 990 CpG island CpG island 22732
Tssr5622 X 57053281 to 57053301 20 + TSS region transcription start site region 5622
Tssr161014 X 57053549 to 57053597 48 + TSS region transcription start site region 161014
Htatsf1 X 57053583 to 57067183 13600 + protein coding gene HIV TAT specific factor 1
Tssr161015 X 57053849 to 57053868 19 + TSS region transcription start site region 161015
Tssr161016 X 57053880 to 57053908 28 + TSS region transcription start site region 161016
Tssr161017 X 57066017 to 57066028 11 + TSS region transcription start site region 161017
Tssr161018 X 57066031 to 57066047 16 + TSS region transcription start site region 161018
Tssr161019 X 57066164 to 57066179 15 + TSS region transcription start site region 161019
Tssr161020 X 57066301 to 57066314 13 + TSS region transcription start site region 161020
Tssr161021 X 57066495 to 57066510 15 + TSS region transcription start site region 161021
DXMit75 X 57068354 to 57068454 100 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 75
Pbwg21 X 57068354 to 57068454 100 QTL postnatal body weight growth 21
Pbwg7 X 57068354 to 57068454 100 QTL postnatal body weight growth 7
Vgll1 X 57088106 to 57106540 18434 + protein coding gene vestigial like family member 1
Tssr163428 X 57176870 to 57176878 8 - TSS region transcription start site region 163428
Tssr161022 X 57179783 to 57179790 7 + TSS region transcription start site region 161022
Tssr163429 X 57181479 to 57181486 7 - TSS region transcription start site region 163429
Tssr163430 X 57182629 to 57182636 7 - TSS region transcription start site region 163430
Tssr163431 X 57188920 to 57188926 6 - TSS region transcription start site region 163431
Tssr161023 X 57196386 to 57196411 25 + TSS region transcription start site region 161023
Tssr161024 X 57196588 to 57196596 8 + TSS region transcription start site region 161024
Tssr163432 X 57200396 to 57200425 29 - TSS region transcription start site region 163432
Tssr161025 X 57200510 to 57200519 9 + TSS region transcription start site region 161025
Tssr161026 X 57200532 to 57200546 14 + TSS region transcription start site region 161026
Tssr161027 X 57200557 to 57200571 14 + TSS region transcription start site region 161027
Tssr161028 X 57200613 to 57200633 20 + TSS region transcription start site region 161028
Gm14718 X 57200643 to 57204378 3735 + antisense lncRNA gene predicted gene 14718