Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:56551440-56661588

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16 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr163418 X 56553144 to 56553179 35 - TSS region transcription start site region 163418
Mmgt1 X 56585512 to 56597919 12407 - protein coding gene membrane magnesium transporter 1
n-TAagc2 X 56587539 to 56587611 72 + tRNA gene nuclear encoded tRNA alanine 2 (anticodon AGC)
Mir5116 X 56587852 to 56587914 62 - miRNA gene microRNA 5116
Cpgi22729 X 56597703 to 56598314 611 CpG island CpG island 22729
Tssr163419 X 56597867 to 56597879 12 - TSS region transcription start site region 163419
Tssr163420 X 56597880 to 56597971 91 - TSS region transcription start site region 163420
Tssr163421 X 56598015 to 56598025 10 - TSS region transcription start site region 163421
Tssr163422 X 56598031 to 56598045 14 - TSS region transcription start site region 163422
Tssr163423 X 56598081 to 56598107 26 - TSS region transcription start site region 163423
Gm36239 X 56598192 to 56599656 1464 + lncRNA gene predicted gene, 36239
DXMit108 X 56606440 to 56606588 148 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 108
Cpgi22730 X 56609737 to 56610358 621 CpG island CpG island 22730
Tssr160992 X 56609751 to 56609797 46 + TSS region transcription start site region 160992
Slc9a6 X 56609757 to 56664230 54473 + protein coding gene solute carrier family 9 (sodium/hydrogen exchanger), member 6
Tssr160993 X 56609843 to 56609864 21 + TSS region transcription start site region 160993