Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:55859658-56404920

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm14623 X 55862223 to 55876613 14390 + pseudogene predicted gene 14623
Gm6668 X 55874617 to 55875471 854 - pseudogene predicted gene 6668
Gm35586 X 55891713 to 55895852 4139 - protein coding gene predicted gene, 35586
Tssr163410 X 55895848 to 55895853 5 - TSS region transcription start site region 163410
Gm14624 X 55904723 to 55912887 8164 + pseudogene predicted gene 14624
Gm35536 X 55920006 to 55925907 5901 - lncRNA gene predicted gene, 35536
Gm46668 X 55951058 to 55951436 378 - pseudogene predicted gene, 46668
Gm35487 X 55971903 to 55972766 863 - lncRNA gene predicted gene, 35487
Gm46669 X 55975060 to 55975438 378 - pseudogene predicted gene, 46669
Gm22103 X 56070664 to 56070784 120 + miRNA gene predicted gene, 22103
Gm19151 X 56094216 to 56094941 725 - pseudogene predicted gene, 19151
Gm46670 X 56106814 to 56128318 21504 - pseudogene predicted gene, 46670
Gm14638 X 56129658 to 56134920 5262 + pseudogene predicted gene 14638
Tssr160977 X 56136547 to 56136583 36 + TSS region transcription start site region 160977
3830403N18Rik X 56136572 to 56153498 16926 + protein coding gene RIKEN cDNA 3830403N18 gene
Gm14639 X 56155528 to 56156393 865 - pseudogene predicted gene 14639
Gm773 X 56189827 to 56212881 23054 - protein coding gene predicted gene 773
Gm14627 X 56190932 to 56191498 566 + pseudogene predicted gene 14627
Tssr163411 X 56212903 to 56212915 12 - TSS region transcription start site region 163411
Gm2120 X 56214881 to 56215397 516 + pseudogene predicted gene 2120
Gm35893 X 56223150 to 56226516 3366 - lncRNA gene predicted gene, 35893
Gm35953 X 56277085 to 56293278 16193 - protein coding gene predicted gene, 35953
Tssr160978 X 56317515 to 56317540 25 + TSS region transcription start site region 160978
1600025M17Rik X 56317608 to 56320664 3056 + lincRNA gene RIKEN cDNA 1600025M17 gene
Tssr160979 X 56317642 to 56317655 13 + TSS region transcription start site region 160979
Tssr160980 X 56322976 to 56322989 13 + TSS region transcription start site region 160980
Gm38625 X 56344120 to 56346215 2095 - lncRNA gene predicted gene, 38625
Cpgi22726 X 56346261 to 56346600 339 CpG island CpG island 22726
Tssr160981 X 56346390 to 56346415 25 + TSS region transcription start site region 160981
Zfp449 X 56346400 to 56365674 19274 + protein coding gene zinc finger protein 449
Gm2155 X 56371620 to 56374790 3170 - antisense lncRNA gene predicted gene 2155
Cpgi22727 X 56374398 to 56375056 658 CpG island CpG island 22727
Tssr160982 X 56374550 to 56374617 67 + TSS region transcription start site region 160982
Smim10l2a X 56374586 to 56377799 3213 + protein coding gene small integral membrane protein 10 like 2A
Tssr160983 X 56374805 to 56374834 29 + TSS region transcription start site region 160983
6530403M18Rik X 56381198 to 56382576 1378 unclassified non-coding RNA gene RIKEN cDNA 6530403M18 gene
Gm39514 X 56389268 to 56395835 6567 + lncRNA gene predicted gene, 39514