Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:53641922-53771578

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20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rtl8a X 53642488 to 53643682 1194 - protein coding gene retrotransposon Gag like 8A
Tssr163398 X 53643717 to 53643769 52 - TSS region transcription start site region 163398
Tssr163399 X 53643771 to 53643778 7 - TSS region transcription start site region 163399
Rtl8b X 53669177 to 53670408 1231 - protein coding gene retrotransposon Gag like 8B
Tssr163400 X 53670397 to 53670456 59 - TSS region transcription start site region 163400
Tssr163401 X 53670508 to 53670540 32 - TSS region transcription start site region 163401
4933416I08Rik X 53686637 to 53690919 4282 + pseudogene RIKEN cDNA 4933416I08 gene
Tssr160971 X 53688075 to 53688110 35 + TSS region transcription start site region 160971
AW822252 X 53696922 to 53716578 19656 - lincRNA gene expressed sequence AW822252
DXMit167 X 53713482 to 53713603 121 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 167
Cpgi22721 X 53716343 to 53716856 513 CpG island CpG island 22721
Tssr160972 X 53724639 to 53724644 5 + TSS region transcription start site region 160972
Tssr160973 X 53724795 to 53724815 20 + TSS region transcription start site region 160973
4930502E18Rik X 53724826 to 53738441 13615 + protein coding gene RIKEN cDNA 4930502E18 gene
Tssr160974 X 53724836 to 53724844 8 + TSS region transcription start site region 160974
Tssr160975 X 53724894 to 53724897 3 + TSS region transcription start site region 160975
1700013H16Rik X 53742901 to 53757831 14930 - protein coding gene RIKEN cDNA 1700013H16 gene
Cpgi22722 X 53756732 to 53757120 388 CpG island CpG island 22722
Tssr163402 X 53757836 to 53757849 13 - TSS region transcription start site region 163402
Gm6025 X 53762815 to 53763015 200 + pseudogene predicted pseudogene 6025