MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region X:53615508-53725540

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm14592	X	53623291 to 53623840	549	+	pseudogene	predicted gene 14592
Gm14600	X	53633336 to 53633965	629	+	pseudogene	predicted gene 14600
Rtl8a	X	53642488 to 53643682	1194	-	protein coding gene	retrotransposon Gag like 8A
Tssr163398	X	53643717 to 53643769	52	-	TSS region	transcription start site region 163398
Tssr163399	X	53643771 to 53643778	7	-	TSS region	transcription start site region 163399
Rtl8b	X	53669177 to 53670408	1231	-	protein coding gene	retrotransposon Gag like 8B
Tssr163400	X	53670397 to 53670456	59	-	TSS region	transcription start site region 163400
Tssr163401	X	53670508 to 53670540	32	-	TSS region	transcription start site region 163401
4933416I08Rik	X	53686637 to 53690919	4282	+	pseudogene	RIKEN cDNA 4933416I08 gene
Tssr160971	X	53688075 to 53688110	35	+	TSS region	transcription start site region 160971
AW822252	X	53696922 to 53716578	19656	-	lincRNA gene	expressed sequence AW822252
DXMit167	X	53713482 to 53713603	121		DNA segment	DNA segment, Chr X, Massachusetts Institute of Technology 167
Cpgi22721	X	53716343 to 53716856	513		CpG island	CpG island 22721
Tssr160972	X	53724639 to 53724644	5	+	TSS region	transcription start site region 160972
Tssr160973	X	53724795 to 53724815	20	+	TSS region	transcription start site region 160973
4930502E18Rik	X	53724826 to 53738441	13615	+	protein coding gene	RIKEN cDNA 4930502E18 gene
Tssr160974	X	53724836 to 53724844	8	+	TSS region	transcription start site region 160974
Tssr160975	X	53724894 to 53724897	3	+	TSS region	transcription start site region 160975