Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:53110086-53370098

Filter by:
29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bw19 X 47288043 to 53323450 6035407 QTL body weight QTL 19
Aggr2 X 49982290 to 53170319 3188029 QTL aggression 2
Gm35988 X 53063860 to 53167728 103868 + lncRNA gene predicted gene, 35988
Plac1 X 53069995 to 53240111 170116 - protein coding gene placental specific protein 1
Tssr163382 X 53114362 to 53114368 6 - TSS region transcription start site region 163382
Tssr163383 X 53114392 to 53114412 20 - TSS region transcription start site region 163383
Tssr163384 X 53114509 to 53114524 15 - TSS region transcription start site region 163384
Tssr163385 X 53114555 to 53114566 11 - TSS region transcription start site region 163385
Tssr163386 X 53121704 to 53121754 50 - TSS region transcription start site region 163386
DXMit159 X 53170226 to 53170319 93 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 159
Tssr163387 X 53209774 to 53209800 26 - TSS region transcription start site region 163387
Tssr163388 X 53209820 to 53209834 14 - TSS region transcription start site region 163388
DXMit91 X 53223092 to 53223239 147 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 91
Tssr163389 X 53240086 to 53240098 12 - TSS region transcription start site region 163389
Tssr163390 X 53240101 to 53240107 6 - TSS region transcription start site region 163390
Fam122b X 53243415 to 53269805 26390 - protein coding gene family with sequence similarity 122, member B
Tssr163391 X 53266297 to 53266327 30 - TSS region transcription start site region 163391
Tssr163392 X 53269022 to 53269068 46 - TSS region transcription start site region 163392
Cpgi22720 X 53269451 to 53269677 226 CpG island CpG island 22720
Tssr163393 X 53269786 to 53269858 72 - TSS region transcription start site region 163393
Tssr160962 X 53273418 to 53273429 11 + TSS region transcription start site region 160962
Fam122c X 53273424 to 53331185 57761 + protein coding gene family with sequence similarity 122, member C
Tssr160963 X 53273445 to 53273455 10 + TSS region transcription start site region 160963
Gm23718 X 53306177 to 53306483 306 + unclassified non-coding RNA gene predicted gene, 23718
Gm14585 X 53314533 to 53315166 633 + pseudogene predicted gene 14585
DXMit68 X 53323323 to 53323450 127 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 68
Pubt1 X 53323323 to 62836890 9513567 QTL pubertal timing 1
Lvic5 X 53323323 to 63983961 10660638 QTL liver iron content 5
Mospd1 X 53344598 to 53370502 25904 - protein coding gene motile sperm domain containing 1