MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region X:53019860-53059872

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Hprt	X	52988137 to 53021659	33522	+	protein coding gene	hypoxanthine guanine phosphoribosyl transferase
Tssr160961	X	53020095 to 53020122	27	+	TSS region	transcription start site region 160961
DXMit23	X	53029767 to 53030015	248		DNA segment	DNA segment, Chr X, Massachusetts Institute of Technology 23
Tssr5620	X	53039860 to 53039872	12	+	TSS region	transcription start site region 5620
Mir450b	X	53047997 to 53048078	81	-	miRNA gene	microRNA 450b
Mirc47	X	53047997 to 53048367	370		complex/cluster/region	microRNA cluster 47, including Mir450b through Mir450a-2
Mir450-1	X	53048154 to 53048244	90	-	miRNA gene	microRNA 450-1
Mir450-2	X	53048299 to 53048367	68	-	miRNA gene	microRNA 450-2
Mir542	X	53049403 to 53049487	84	-	miRNA gene	microRNA 542
Gm28730	X	53051194 to 53053159	1965	-	lincRNA gene	predicted gene 28730
Mir351	X	53053255 to 53053353	98	-	miRNA gene	microRNA 351
Mirc24	X	53053255 to 53054349	1094		complex/cluster/region	microRNA cluster 24, including Mir351 through Mir322
Tssr163376	X	53053271 to 53053275	4	-	TSS region	transcription start site region 163376
Mir503	X	53053984 to 53054054	70	-	miRNA gene	microRNA 503
Mir322	X	53054255 to 53054349	94	-	miRNA gene	microRNA 322
C430049B03Rik	X	53055046 to 53057190	2144	-	lncRNA gene	RIKEN cDNA C430049B03 gene
Tssr163377	X	53055376 to 53055391	15	-	TSS region	transcription start site region 163377
Cpgi22719	X	53056738 to 53057503	765		CpG island	CpG island 22719
Tssr163378	X	53057183 to 53057200	17	-	TSS region	transcription start site region 163378