Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:53004767-53055015

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17 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hprt X 52988137 to 53021659 33522 + protein coding gene hypoxanthine guanine phosphoribosyl transferase
Tssr160959 X 53008663 to 53008693 30 + TSS region transcription start site region 160959
Tssr160960 X 53016358 to 53016404 46 + TSS region transcription start site region 160960
Tssr160961 X 53020095 to 53020122 27 + TSS region transcription start site region 160961
DXMit23 X 53029767 to 53030015 248 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 23
Tssr5620 X 53039860 to 53039872 12 + TSS region transcription start site region 5620
Mirc47 X 53047997 to 53048367 370 complex/cluster/region microRNA cluster 47, including Mir450b through Mir450a-2
Mir450b X 53047997 to 53048078 81 - miRNA gene microRNA 450b
Mir450-1 X 53048154 to 53048244 90 - miRNA gene microRNA 450-1
Mir450-2 X 53048299 to 53048367 68 - miRNA gene microRNA 450-2
Mir542 X 53049403 to 53049487 84 - miRNA gene microRNA 542
Gm28730 X 53051194 to 53053159 1965 - lincRNA gene predicted gene 28730
Mir351 X 53053255 to 53053353 98 - miRNA gene microRNA 351
Mirc24 X 53053255 to 53054349 1094 complex/cluster/region microRNA cluster 24, including Mir351 through Mir322
Tssr163376 X 53053271 to 53053275 4 - TSS region transcription start site region 163376
Mir503 X 53053984 to 53054054 70 - miRNA gene microRNA 503
Mir322 X 53054255 to 53054349 94 - miRNA gene microRNA 322