MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region X:52393758-52703763

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gpc3	X	52272426 to 52613950	341524	-	protein coding gene	glypican 3
Tssr163359	X	52397186 to 52397201	15	-	TSS region	transcription start site region 163359
Mir717	X	52422407 to 52422515	108	-	miRNA gene	microRNA 717
DXJti1	X	52424230 to 52424330	100		DNA segment	DNA segment, Chr X, Japan Tobacco Inc. 1
Tssr163360	X	52428836 to 52428851	15	-	TSS region	transcription start site region 163360
Tssr163361	X	52541994 to 52541999	5	-	TSS region	transcription start site region 163361
Tssr163362	X	52543191 to 52543195	4	-	TSS region	transcription start site region 163362
Tssr163363	X	52548758 to 52548763	5	-	TSS region	transcription start site region 163363
Tssr163364	X	52569119 to 52569121	2	-	TSS region	transcription start site region 163364
A630012P03Rik	X	52575843 to 52619047	43204	+	antisense lncRNA gene	RIKEN cDNA A630012P03 gene
Tssr163365	X	52578138 to 52578142	4	-	TSS region	transcription start site region 163365
Tssr163366	X	52582921 to 52582951	30	-	TSS region	transcription start site region 163366
Cpgi22715	X	52613372 to 52614435	1063		CpG island	CpG island 22715
Tssr163367	X	52613897 to 52613910	13	-	TSS region	transcription start site region 163367
Tssr163368	X	52613913 to 52613924	11	-	TSS region	transcription start site region 163368
Tssr163369	X	52613936 to 52613979	43	-	TSS region	transcription start site region 163369
Tssr163370	X	52614217 to 52614228	11	-	TSS region	transcription start site region 163370
Tssr163371	X	52614239 to 52614260	21	-	TSS region	transcription start site region 163371