MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region X:51868021-52350252

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
1700080O16Rik	X	51968695 to 51972772	4077	-	protein coding gene	RIKEN cDNA 1700080O16 gene
Tssr163348	X	51972771 to 51972798	27	-	TSS region	transcription start site region 163348
Gm35790	X	51972854 to 51974700	1846	+	lncRNA gene	predicted gene, 35790
Tssr163349	X	52052282 to 52052287	5	-	TSS region	transcription start site region 163349
Tssr163350	X	52052517 to 52052532	15	-	TSS region	transcription start site region 163350
Gpc4	X	52053021 to 52165252	112231	-	protein coding gene	glypican 4
Tssr163351	X	52053101 to 52053125	24	-	TSS region	transcription start site region 163351
Tssr163352	X	52053156 to 52053167	11	-	TSS region	transcription start site region 163352
Tssr163353	X	52053444 to 52053448	4	-	TSS region	transcription start site region 163353
Cpgi22714	X	52164263 to 52165565	1302		CpG island	CpG island 22714
Tssr163354	X	52165269 to 52165280	11	-	TSS region	transcription start site region 163354
Tssr163355	X	52165312 to 52165335	23	-	TSS region	transcription start site region 163355
Tssr163356	X	52165345 to 52165362	17	-	TSS region	transcription start site region 163356
Gpc3	X	52272426 to 52613950	341524	-	protein coding gene	glypican 3
Tssr163357	X	52272672 to 52272694	22	-	TSS region	transcription start site region 163357
Gm14582	X	52296181 to 52333679	37498	+	antisense lncRNA gene	predicted gene 14582
Tssr163358	X	52310107 to 52310111	4	-	TSS region	transcription start site region 163358
D230050J18Rik	X	52350174 to 52351809	1635		unclassified gene	RIKEN cDNA D230050J18 gene