Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:51832517-52272532

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18 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm35727 X 51681824 to 51864066 182242 + lncRNA gene predicted gene, 35727
Gm7840 X 51840083 to 51840615 532 - pseudogene predicted gene 7840
Tssr163347 X 51840614 to 51840617 3 - TSS region transcription start site region 163347
Gm22539 X 51844685 to 51844801 116 + snoRNA gene predicted gene, 22539
1700080O16Rik X 51968695 to 51972772 4077 - protein coding gene RIKEN cDNA 1700080O16 gene
Tssr163348 X 51972771 to 51972798 27 - TSS region transcription start site region 163348
Gm35790 X 51972854 to 51974700 1846 + lncRNA gene predicted gene, 35790
Tssr163349 X 52052282 to 52052287 5 - TSS region transcription start site region 163349
Tssr163350 X 52052517 to 52052532 15 - TSS region transcription start site region 163350
Gpc4 X 52053021 to 52165252 112231 - protein coding gene glypican 4
Tssr163351 X 52053101 to 52053125 24 - TSS region transcription start site region 163351
Tssr163352 X 52053156 to 52053167 11 - TSS region transcription start site region 163352
Tssr163353 X 52053444 to 52053448 4 - TSS region transcription start site region 163353
Cpgi22714 X 52164263 to 52165565 1302 CpG island CpG island 22714
Tssr163354 X 52165269 to 52165280 11 - TSS region transcription start site region 163354
Tssr163355 X 52165312 to 52165335 23 - TSS region transcription start site region 163355
Tssr163356 X 52165345 to 52165362 17 - TSS region transcription start site region 163356
Gpc3 X 52272426 to 52613950 341524 - protein coding gene glypican 3