Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:51219888-52141568

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm5388 X 51218877 to 51219993 1116 - pseudogene predicted gene 5388
Tssr163340 X 51220067 to 51220074 7 - TSS region transcription start site region 163340
Gm14621 X 51238844 to 51239532 688 - pseudogene predicted gene 14621
Hs6st2 X 51387212 to 51681856 294644 - protein coding gene heparan sulfate 6-O-sulfotransferase 2
Tssr163341 X 51450258 to 51450261 3 - TSS region transcription start site region 163341
DXMit106 X 51613679 to 51613763 84 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 106
Gm14581 X 51629490 to 51629687 197 - pseudogene predicted gene 14581
Cpgi22713 X 51679888 to 51681568 1680 CpG island CpG island 22713
Tssr163342 X 51681251 to 51681263 12 - TSS region transcription start site region 163342
Tssr163343 X 51681333 to 51681365 32 - TSS region transcription start site region 163343
Tssr163344 X 51681366 to 51681394 28 - TSS region transcription start site region 163344
Tssr163345 X 51681450 to 51681461 11 - TSS region transcription start site region 163345
Gm35727 X 51681824 to 51864066 182242 + lncRNA gene predicted gene, 35727
2900011F02Rik X 51682088 to 51683754 1666 unclassified gene RIKEN cDNA 2900011F02 gene
Obq6 X 51683498 to 71391145 19707647 QTL obesity QTL 6
DXMit166 X 51683498 to 51683611 113 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 166
Usp26 X 51753959 to 51801233 47274 - protein coding gene ubiquitin specific peptidase 26
Tssr160935 X 51792098 to 51792104 6 + TSS region transcription start site region 160935
Tssr163346 X 51801078 to 51801083 5 - TSS region transcription start site region 163346
Gm7840 X 51840083 to 51840615 532 - pseudogene predicted gene 7840
Tssr163347 X 51840614 to 51840617 3 - TSS region transcription start site region 163347
Gm22539 X 51844685 to 51844801 116 + snoRNA gene predicted gene, 22539
1700080O16Rik X 51968695 to 51972772 4077 - protein coding gene RIKEN cDNA 1700080O16 gene
Tssr163348 X 51972771 to 51972798 27 - TSS region transcription start site region 163348
Gm35790 X 51972854 to 51974700 1846 + lncRNA gene predicted gene, 35790
Tssr163349 X 52052282 to 52052287 5 - TSS region transcription start site region 163349
Tssr163350 X 52052517 to 52052532 15 - TSS region transcription start site region 163350
Gpc4 X 52053021 to 52165252 112231 - protein coding gene glypican 4
Tssr163351 X 52053101 to 52053125 24 - TSS region transcription start site region 163351
Tssr163352 X 52053156 to 52053167 11 - TSS region transcription start site region 163352
Tssr163353 X 52053444 to 52053448 4 - TSS region transcription start site region 163353