Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:50466174-51268103

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51 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr160930 X 50537331 to 50537372 41 + TSS region transcription start site region 160930
Gm35612 X 50537389 to 50562598 25209 + lncRNA gene predicted gene, 35612
Gm14620 X 50542402 to 50542784 382 - pseudogene predicted gene 14620
Firre X 50563120 to 50635321 72201 - lncRNA gene functional intergenic repeating RNA element
Tssr163313 X 50585487 to 50585491 4 - TSS region transcription start site region 163313
Tssr163314 X 50635247 to 50635272 25 - TSS region transcription start site region 163314
Tssr163315 X 50635283 to 50635328 45 - TSS region transcription start site region 163315
Tssr160931 X 50827558 to 50827585 27 + TSS region transcription start site region 160931
Stk26 X 50841174 to 50893103 51929 + protein coding gene serine/threonine kinase 26
Cpgi22710 X 50841197 to 50842000 803 CpG island CpG island 22710
Tssr160932 X 50841389 to 50841421 32 + TSS region transcription start site region 160932
Tssr160933 X 50841434 to 50841449 15 + TSS region transcription start site region 160933
DXMit192 X 50876243 to 50876365 122 DNA segment DNA Segment, Chr X, Massachusetts Institute of Technology 192
Frmd7 X 50895180 to 50942710 47530 - protein coding gene FERM domain containing 7
DXMit83 X 50924915 to 50925064 149 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 83
Tssr163316 X 50942739 to 50942758 19 - TSS region transcription start site region 163316
Tssr163317 X 50942762 to 50942773 11 - TSS region transcription start site region 163317
Tssr163318 X 50942802 to 50942809 7 - TSS region transcription start site region 163318
Tssr163319 X 50943603 to 50943622 19 - TSS region transcription start site region 163319
Rap2c X 51003912 to 51018018 14106 - protein coding gene RAP2C, member of RAS oncogene family
Cpgi22711 X 51017883 to 51019077 1194 CpG island CpG island 22711
Tssr163320 X 51017908 to 51017923 15 - TSS region transcription start site region 163320
Tssr163321 X 51017924 to 51017939 15 - TSS region transcription start site region 163321
Tssr163322 X 51017967 to 51018009 42 - TSS region transcription start site region 163322
Tssr163323 X 51018011 to 51018032 21 - TSS region transcription start site region 163323
Tssr163324 X 51018040 to 51018064 24 - TSS region transcription start site region 163324
Tssr163325 X 51018609 to 51018683 74 - TSS region transcription start site region 163325
Tssr163326 X 51018717 to 51018746 29 - TSS region transcription start site region 163326
Tssr163327 X 51020043 to 51020077 34 - TSS region transcription start site region 163327
Tssr160934 X 51020870 to 51020880 10 + TSS region transcription start site region 160934
Gm5387 X 51043963 to 51044819 856 + pseudogene predicted gene 5387
MHAa97h7 X 51086637 to 51086793 156 DNA segment DNA segment, MHAa97h7
Tssr163328 X 51115943 to 51115965 22 - TSS region transcription start site region 163328
Tssr163329 X 51116104 to 51116107 3 - TSS region transcription start site region 163329
Mbnl3 X 51117269 to 51206532 89263 - protein coding gene muscleblind like splicing factor 3
Tssr163330 X 51130165 to 51130198 33 - TSS region transcription start site region 163330
Tssr163331 X 51146414 to 51146416 2 - TSS region transcription start site region 163331
Cpgi22712 X 51204698 to 51206257 1559 CpG island CpG island 22712
Tssr163332 X 51204775 to 51204788 13 - TSS region transcription start site region 163332
Tssr163333 X 51205616 to 51205638 22 - TSS region transcription start site region 163333
Tssr163334 X 51205640 to 51205671 31 - TSS region transcription start site region 163334
Tssr163335 X 51205773 to 51205839 66 - TSS region transcription start site region 163335
Tssr163336 X 51205852 to 51205874 22 - TSS region transcription start site region 163336
Tssr163337 X 51205878 to 51205900 22 - TSS region transcription start site region 163337
Tssr163338 X 51205902 to 51205931 29 - TSS region transcription start site region 163338
Tssr163339 X 51206017 to 51206033 16 - TSS region transcription start site region 163339
Gm7834 X 51212511 to 51212947 436 - pseudogene predicted gene 7834
Gm5388 X 51218877 to 51219993 1116 - pseudogene predicted gene 5388
Gm23417 X 51219110 to 51219192 82 - miRNA gene predicted gene, 23417
Tssr163340 X 51220067 to 51220074 7 - TSS region transcription start site region 163340
Gm14621 X 51238844 to 51239532 688 - pseudogene predicted gene 14621