Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:48918195-49658218

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr160921 X 48967979 to 48967982 3 + TSS region transcription start site region 160921
Enox2 X 49009707 to 49288244 278537 - protein coding gene ecto-NOX disulfide-thiol exchanger 2
Tssr163302 X 49084442 to 49084450 8 - TSS region transcription start site region 163302
Gm35210 X 49098922 to 49103638 4716 - pseudogene predicted gene, 35210
Gm15034 X 49158223 to 49158571 348 + pseudogene predicted gene 15034
Gm15036 X 49164908 to 49165307 399 + pseudogene predicted gene 15036
Tssr163303 X 49273655 to 49273667 12 - TSS region transcription start site region 163303
Tssr163304 X 49273757 to 49273768 11 - TSS region transcription start site region 163304
Tssr163305 X 49273808 to 49273819 11 - TSS region transcription start site region 163305
Tssr163306 X 49288195 to 49288218 23 - TSS region transcription start site region 163306
Gm39513 X 49288215 to 49315605 27390 + lncRNA gene predicted gene, 39513
Tssr163307 X 49288229 to 49288265 36 - TSS region transcription start site region 163307
Gm14696 X 49313319 to 49345237 31918 - lincRNA gene predicted gene 14696
Gm14697 X 49332409 to 49447972 115563 - antisense lncRNA gene predicted gene 14697
Tssr160922 X 49463926 to 49463973 47 + TSS region transcription start site region 160922
Arhgap36 X 49463945 to 49500244 36299 + protein coding gene Rho GTPase activating protein 36
Cpgi22705 X 49470500 to 49470904 404 CpG island CpG island 22705
Tssr160923 X 49470532 to 49470548 16 + TSS region transcription start site region 160923
Tssr160924 X 49470555 to 49470579 24 + TSS region transcription start site region 160924
Cpgi22706 X 49480296 to 49480590 294 CpG island CpG island 22706
Tssr160925 X 49485088 to 49485122 34 + TSS region transcription start site region 160925
Tssr160926 X 49493105 to 49493114 9 + TSS region transcription start site region 160926
Tssr160927 X 49493116 to 49493139 23 + TSS region transcription start site region 160927
Tssr160928 X 49493142 to 49493174 32 + TSS region transcription start site region 160928
Cpgi22707 X 49493655 to 49494335 680 CpG island CpG island 22707
Cpgi22708 X 49495270 to 49495469 199 CpG island CpG island 22708
Tssr160929 X 49499056 to 49499068 12 + TSS region transcription start site region 160929
Gm15037 X 49560626 to 49560884 258 + pseudogene predicted gene 15037
Gm18695 X 49590212 to 49591589 1377 - pseudogene predicted gene, 18695