Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:46905791-48026863

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bw19 X 47288043 to 53323450 6035407 QTL body weight QTL 19
DXMit226 X 47288043 to 47288166 123 DNA segment DNA Segment, Chr X, Massachusetts Institute of Technology 226
Gm14609 X 47380433 to 47381334 901 - pseudogene predicted gene 14609
Gm14610 X 47387020 to 47387985 965 - pseudogene predicted gene 14610
Gm5636 X 47433043 to 47436541 3498 - unclassified gene predicted gene 5636
Gm39510 X 47465791 to 47466863 1072 - lncRNA gene predicted gene, 39510
Gm4908 X 47471808 to 47472812 1004 + pseudogene predicted gene 4908
LOC100417627 X 47583196 to 47583869 673 - pseudogene immunoglobulin superfamily, member 1 pseudogene
Gm14608 X 47586018 to 47587561 1543 + pseudogene predicted gene 14608
Gm6480 X 47724569 to 47725979 1410 + pseudogene predicted pseudogene 6480
40.MMHAP76FLF4 X 47776949 to 47777125 176 DNA segment DNA segment, 40.MMHAP76FLF4
Smarca1 X 47809370 to 47892575 83205 - protein coding gene SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1
Cpgi22688 X 47892078 to 47892519 441 CpG island CpG island 22688
Tssr163261 X 47892405 to 47892414 9 - TSS region transcription start site region 163261
Tssr163262 X 47892444 to 47892455 11 - TSS region transcription start site region 163262
Tssr163263 X 47892467 to 47892489 22 - TSS region transcription start site region 163263
Tssr163264 X 47892502 to 47892525 23 - TSS region transcription start site region 163264
Tssr163265 X 47892557 to 47892564 7 - TSS region transcription start site region 163265
Gm14648 X 47900345 to 47900827 482 + pseudogene predicted gene 14648
Tssr160873 X 47902775 to 47902792 17 + TSS region transcription start site region 160873
Ocrl X 47912387 to 47965868 53481 + protein coding gene OCRL, inositol polyphosphate-5-phosphatase
Tssr160874 X 47912432 to 47912442 10 + TSS region transcription start site region 160874
Tssr160875 X 47912445 to 47912464 19 + TSS region transcription start site region 160875
Tssr160876 X 47912469 to 47912481 12 + TSS region transcription start site region 160876
Gm36658 X 48000015 to 48000628 613 + pseudogene predicted gene, 36658
Gm7743 X 48009954 to 48011071 1117 + pseudogene predicted gene 7743
Tssr5618 X 48010416 to 48010431 15 + TSS region transcription start site region 5618
Apln X 48025146 to 48034852 9706 - protein coding gene apelin