Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:42402479-42602489

18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
B230118I11Rik	X	42381014 to 42406629	25615	+	lncRNA gene	RIKEN cDNA B230118I11 gene
Tssr160852	X	42424380 to 42424390	10	+	TSS region	transcription start site region 160852
Tssr160853	X	42432484 to 42432485	1	+	TSS region	transcription start site region 160853
Tssr160854	X	42432544 to 42432565	21	+	TSS region	transcription start site region 160854
Tex13d	X	42489361 to 42491953	2592	+	protein coding gene	TEX13 family member D
Tex13c2	X	42489691 to 42491524	1833	+	protein coding gene	TEX13 family member C2
Cpgi22685	X	42489748 to 42489970	222		CpG island	CpG island 22685
Tssr160855	X	42502205 to 42502207	2	+	TSS region	transcription start site region 160855
Tssr160856	X	42502466 to 42502469	3	+	TSS region	transcription start site region 160856
Tssr160857	X	42502479 to 42502489	10	+	TSS region	transcription start site region 160857
Tssr160858	X	42502507 to 42502522	15	+	TSS region	transcription start site region 160858
Tssr160859	X	42502533 to 42502543	10	+	TSS region	transcription start site region 160859
Sh2d1a	X	42502565 to 42522097	19532	+	protein coding gene	SH2 domain containing 1A
Tssr160860	X	42502596 to 42502652	56	+	TSS region	transcription start site region 160860
Tssr160861	X	42504769 to 42504787	18	+	TSS region	transcription start site region 160861
Tssr160862	X	42505246 to 42505258	12	+	TSS region	transcription start site region 160862
Tenm1	X	42527866 to 43429126	901260	-	protein coding gene	teneurin transmembrane protein 1
DXMit243	X	42539110 to 42539258	148		DNA segment	DNA Segment, Chr X, Massachusetts Institute of Technology-243