Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:42262866-43694126

Filter by:
47 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Stag2 X 42149319 to 42277186 127867 + protein coding gene stromal antigen 2
Tssr160849 X 42275266 to 42275281 15 + TSS region transcription start site region 160849
Gm14619 X 42347512 to 42347679 167 + pseudogene predicted gene 14619
Tssr160850 X 42360691 to 42360763 72 + TSS region transcription start site region 160850
Tssr163246 X 42365458 to 42365468 10 - TSS region transcription start site region 163246
Tssr160851 X 42374620 to 42374625 5 + TSS region transcription start site region 160851
B230118I11Rik X 42381014 to 42406629 25615 + lncRNA gene RIKEN cDNA B230118I11 gene
Tssr160852 X 42424380 to 42424390 10 + TSS region transcription start site region 160852
Tssr160853 X 42432484 to 42432485 1 + TSS region transcription start site region 160853
Tssr160854 X 42432544 to 42432565 21 + TSS region transcription start site region 160854
Tex13d X 42489361 to 42491953 2592 + protein coding gene TEX13 family member D
Tex13c2 X 42489691 to 42491524 1833 + protein coding gene TEX13 family member C2
Cpgi22685 X 42489748 to 42489970 222 CpG island CpG island 22685
Tssr160855 X 42502205 to 42502207 2 + TSS region transcription start site region 160855
Tssr160856 X 42502466 to 42502469 3 + TSS region transcription start site region 160856
Tssr160857 X 42502479 to 42502489 10 + TSS region transcription start site region 160857
Tssr160858 X 42502507 to 42502522 15 + TSS region transcription start site region 160858
Tssr160859 X 42502533 to 42502543 10 + TSS region transcription start site region 160859
Sh2d1a X 42502565 to 42522097 19532 + protein coding gene SH2 domain containing 1A
Tssr160860 X 42502596 to 42502652 56 + TSS region transcription start site region 160860
Tssr160861 X 42504769 to 42504787 18 + TSS region transcription start site region 160861
Tssr160862 X 42505246 to 42505258 12 + TSS region transcription start site region 160862
Tenm1 X 42527866 to 43429126 901260 - protein coding gene teneurin transmembrane protein 1
DXMit243 X 42539110 to 42539258 148 DNA segment DNA Segment, Chr X, Massachusetts Institute of Technology-243
Gm23705 X 42681757 to 42681886 129 - snoRNA gene predicted gene, 23705
Gm46667 X 42735832 to 42740084 4252 + pseudogene predicted gene, 46667
Gm14578 X 42888730 to 42889120 390 - pseudogene predicted gene 14578
DXMit1002 X 43029883 to 43030152 269 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 1002
DXMit1003 X 43029964 to 43030079 115 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 1003
Tssr163247 X 43152748 to 43152753 5 - TSS region transcription start site region 163247
Gm24763 X 43254046 to 43254235 189 + snRNA gene predicted gene, 24763
A230106O10Rik X 43367690 to 43368333 643 unclassified gene RIKEN cDNA A230106O10 gene
Gm14587 X 43412086 to 43412743 657 - pseudogene predicted gene 14587
Tssr163248 X 43428845 to 43428862 17 - TSS region transcription start site region 163248
Tssr5616 X 43428926 to 43428929 3 - TSS region transcription start site region 5616
Tssr163249 X 43428947 to 43428956 9 - TSS region transcription start site region 163249
Tssr163250 X 43428970 to 43428985 15 - TSS region transcription start site region 163250
Tssr163251 X 43428986 to 43429013 27 - TSS region transcription start site region 163251
Tssr163252 X 43429028 to 43429050 22 - TSS region transcription start site region 163252
Tssr163253 X 43429055 to 43429069 14 - TSS region transcription start site region 163253
Gm14588 X 43473783 to 43473954 171 - pseudogene predicted gene 14588
Gm14579 X 43589743 to 43590025 282 - pseudogene predicted gene 14579
Tssr160863 X 43590926 to 43590933 7 + TSS region transcription start site region 160863
Tssr160864 X 43590937 to 43590944 7 + TSS region transcription start site region 160864
Tssr160865 X 43590952 to 43590955 3 + TSS region transcription start site region 160865
Tssr160866 X 43590961 to 43590972 11 + TSS region transcription start site region 160866
Tex13c1 X 43591160 to 43593532 2372 + protein coding gene TEX13 family member C1