Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:42235832-43240084

Filter by:
33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Stag2 X 42149319 to 42277186 127867 + protein coding gene stromal antigen 2
Tssr160846 X 42237752 to 42237755 3 + TSS region transcription start site region 160846
Tssr160847 X 42238592 to 42238604 12 + TSS region transcription start site region 160847
Tssr160848 X 42241070 to 42241092 22 + TSS region transcription start site region 160848
Tssr160849 X 42275266 to 42275281 15 + TSS region transcription start site region 160849
Gm14619 X 42347512 to 42347679 167 + pseudogene predicted gene 14619
Tssr160850 X 42360691 to 42360763 72 + TSS region transcription start site region 160850
Tssr163246 X 42365458 to 42365468 10 - TSS region transcription start site region 163246
Tssr160851 X 42374620 to 42374625 5 + TSS region transcription start site region 160851
B230118I11Rik X 42381014 to 42406629 25615 + lncRNA gene RIKEN cDNA B230118I11 gene
Tssr160852 X 42424380 to 42424390 10 + TSS region transcription start site region 160852
Tssr160853 X 42432484 to 42432485 1 + TSS region transcription start site region 160853
Tssr160854 X 42432544 to 42432565 21 + TSS region transcription start site region 160854
Tex13d X 42489361 to 42491953 2592 + protein coding gene TEX13 family member D
Tex13c2 X 42489691 to 42491524 1833 + protein coding gene TEX13 family member C2
Cpgi22685 X 42489748 to 42489970 222 CpG island CpG island 22685
Tssr160855 X 42502205 to 42502207 2 + TSS region transcription start site region 160855
Tssr160856 X 42502466 to 42502469 3 + TSS region transcription start site region 160856
Tssr160857 X 42502479 to 42502489 10 + TSS region transcription start site region 160857
Tssr160858 X 42502507 to 42502522 15 + TSS region transcription start site region 160858
Tssr160859 X 42502533 to 42502543 10 + TSS region transcription start site region 160859
Sh2d1a X 42502565 to 42522097 19532 + protein coding gene SH2 domain containing 1A
Tssr160860 X 42502596 to 42502652 56 + TSS region transcription start site region 160860
Tssr160861 X 42504769 to 42504787 18 + TSS region transcription start site region 160861
Tssr160862 X 42505246 to 42505258 12 + TSS region transcription start site region 160862
Tenm1 X 42527866 to 43429126 901260 - protein coding gene teneurin transmembrane protein 1
DXMit243 X 42539110 to 42539258 148 DNA segment DNA Segment, Chr X, Massachusetts Institute of Technology-243
Gm23705 X 42681757 to 42681886 129 - snoRNA gene predicted gene, 23705
Gm46667 X 42735832 to 42740084 4252 + pseudogene predicted gene, 46667
Gm14578 X 42888730 to 42889120 390 - pseudogene predicted gene 14578
DXMit1002 X 43029883 to 43030152 269 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 1002
DXMit1003 X 43029964 to 43030079 115 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 1003
Tssr163247 X 43152748 to 43152753 5 - TSS region transcription start site region 163247