Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:39385864-41736891

Filter by:
43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Spha1 X 10399986 to 40832775 30432789 QTL sperm head anomaly 1
Gm14550 X 39464779 to 39465185 406 - pseudogene predicted gene 14550
Gm14570 X 39750826 to 39751216 390 - pseudogene predicted gene 14570
Gm14571 X 39796584 to 39797153 569 + pseudogene predicted gene 14571
Cypt14 X 39862919 to 39863604 685 - protein coding gene cysteine-rich perinuclear theca 14
Gm14643 X 39870500 to 40475561 605061 + unclassified non-coding RNA gene predicted gene 14643
Gm26194 X 39976301 to 39976371 70 - miRNA gene predicted gene, 26194
Gm7189 X 40000782 to 40001210 428 - pseudogene predicted pseudogene 7189
Gm16383 X 40001217 to 40001887 670 + pseudogene predicted gene 16383
Gm7190 X 40007137 to 40008588 1451 - pseudogene predicted gene 7190
Gm4986 X 40137008 to 40137556 548 - pseudogene predicted pseudogene 4986
Tssr163235 X 40137584 to 40137592 8 - TSS region transcription start site region 163235
Gm17859 X 40560864 to 40561891 1027 - pseudogene predicted gene, 17859
Gm14575 X 40661423 to 40661979 556 + pseudogene predicted gene 14575
Gm14574 X 40691785 to 40692063 278 + pseudogene predicted gene 14574
Tssr160795 X 40712886 to 40712888 2 + TSS region transcription start site region 160795
Spha2 X 40832621 to 87216531 46383910 QTL sperm head anomaly 2
DXMit50 X 40832621 to 40832775 154 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 50
Gm14576 X 40927001 to 40928111 1110 - pseudogene predicted gene 14576
Gm5385 X 41248575 to 41250133 1558 + pseudogene predicted gene 5385
Tssr163236 X 41288879 to 41288884 5 - TSS region transcription start site region 163236
Tssr163237 X 41335872 to 41335879 7 - TSS region transcription start site region 163237
Gm14577 X 41372259 to 41372498 239 + pseudogene predicted gene 14577
Tssr160796 X 41400598 to 41400603 5 + TSS region transcription start site region 160796
Tssr160797 X 41400657 to 41400668 11 + TSS region transcription start site region 160797
Tssr160798 X 41400687 to 41400700 13 + TSS region transcription start site region 160798
Tssr160799 X 41400716 to 41400729 13 + TSS region transcription start site region 160799
Tssr160800 X 41400805 to 41400833 28 + TSS region transcription start site region 160800
Tssr160801 X 41400839 to 41400885 46 + TSS region transcription start site region 160801
Tssr160802 X 41400902 to 41400907 5 + TSS region transcription start site region 160802
Gria3 X 41401118 to 41678601 277483 + protein coding gene glutamate receptor, ionotropic, AMPA3 (alpha 3)
Tssr160803 X 41401158 to 41401200 42 + TSS region transcription start site region 160803
Tssr160804 X 41401389 to 41401427 38 + TSS region transcription start site region 160804
Tssr160805 X 41401476 to 41401565 89 + TSS region transcription start site region 160805
Tssr160806 X 41401614 to 41401625 11 + TSS region transcription start site region 160806
Tssr160807 X 41414949 to 41414959 10 + TSS region transcription start site region 160807
DXMit58 X 41560036 to 41560235 199 DNA segment DNA Segment, Chr X, Massachusetts Institute of Technology-58
Tssr160808 X 41604795 to 41604799 4 + TSS region transcription start site region 160808
C030001C17Rik X 41627628 to 41628504 876 unclassified gene RIKEN cDNA C030001C17 gene
Gm22413 X 41654234 to 41654318 84 + miRNA gene predicted gene, 22413
A230058F20Rik X 41660673 to 41664187 3514 unclassified gene RIKEN cDNA A230058F20 gene
Tssr160809 X 41673846 to 41673854 8 + TSS region transcription start site region 160809
Gm14614 X 41685994 to 41686377 383 - pseudogene predicted gene 14614