Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:3910423-5900713

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56 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Btbd35f16 X 3955054 to 3957002 1948 - protein coding gene BTB domain containing 35, family member 16
Gm46693 X 3957210 to 4006834 49624 + lncRNA gene predicted gene, 46693
Gm15251 X 3959863 to 3960745 882 + pseudogene predicted gene 15251
Gm17854 X 3959878 to 3960745 867 - pseudogene predicted gene, 17854
Gm15257 X 4033924 to 4034791 867 + pseudogene predicted gene 15257
Btbd35f3 X 4037674 to 4039616 1942 + protein coding gene BTB domain containing 35, family member 3
Gm15258 X 4075022 to 4075762 740 - pseudogene predicted gene 15258
Gm14350 X 4076625 to 4077264 639 - pseudogene predicted gene 14350
Gm14349 X 4119176 to 4119953 777 + pseudogene predicted gene 14349
Tssr160353 X 4136295 to 4136316 21 + TSS region transcription start site region 160353
Gm14358 X 4143537 to 4146415 2878 + pseudogene predicted gene 14358
Gm14362 X 4147732 to 4148004 272 - pseudogene predicted gene 14362
Gm14356 X 4192858 to 4193725 867 + pseudogene predicted gene 14356
Btbd35f28 X 4196576 to 4198535 1959 + protein coding gene BTB domain containing 35, family member 28
Btbd35f20 X 4289286 to 4291245 1959 - protein coding gene BTB domain containing 35, family member 20
Gm14348 X 4294124 to 4294991 867 - pseudogene predicted gene 14348
Gm14364 X 4339453 to 4339719 266 + pseudogene predicted gene 14364
Gm14368 X 4341036 to 4343915 2879 - pseudogene predicted gene 14368
Gm15260 X 4366897 to 4367764 867 + pseudogene predicted gene 15260
Btbd35f17 X 4370636 to 4372595 1959 + protein coding gene BTB domain containing 35, family member 17
Gm6019 X 4409489 to 4410192 703 - pseudogene predicted gene 6019
Gm9427 X 4455353 to 4456003 650 + pseudogene predicted pseudogene 9427
Gm46675 X 4496082 to 4515309 19227 - lncRNA gene predicted gene, 46675
Gm15256 X 4511847 to 4512729 882 + pseudogene predicted gene 15256
Gm5925 X 4515674 to 4517170 1496 + pseudogene predicted gene 5925
Gm4725 X 4553787 to 4554370 583 + pseudogene predicted gene 4725
Gm46682 X 4673381 to 4674968 1587 + pseudogene predicted gene, 46682
Gm9498 X 4770778 to 4771068 290 - pseudogene predicted gene 9498
Gm15252 X 4796663 to 4797530 867 + pseudogene predicted gene 15252
Btbd35f4 X 4800496 to 4801986 1490 + protein coding gene BTB domain containing 35, family member 4
Gm4726 X 4839207 to 4839942 735 - pseudogene predicted gene 4726
Gm3757 X 4882412 to 4883086 674 + pseudogene predicted pseudogene 3757
Tssr160354 X 4899361 to 4899381 20 + TSS region transcription start site region 160354
Gm15259 X 4905423 to 4905713 290 + pseudogene predicted gene 15259
Gm15254 X 4906982 to 4907254 272 - pseudogene predicted gene 15254
Gm17860 X 4948407 to 4949274 867 + pseudogene predicted gene, 17860
Btbd35f27 X 4952135 to 4954077 1942 + protein coding gene BTB domain containing 35, family member 27
Gm14370 X 5144852 to 5145719 867 + pseudogene predicted gene 14370
Gm14367 X 5148676 to 5150172 1496 + pseudogene predicted gene 14367
Gm14365 X 5193483 to 5194066 583 + pseudogene predicted gene 14365
Gm9428 X 5276735 to 5277446 711 - pseudogene predicted gene 9428
Gm5924 X 5338858 to 5340457 1599 + pseudogene predicted gene 5924
Gm14369 X 5391640 to 5391924 284 + pseudogene predicted gene 14369
Gm14363 X 5399249 to 5402129 2880 - pseudogene predicted gene 14363
Mycs X 5466904 to 5469265 2361 - protein coding gene myc-like oncogene, s-myc protein
Cpgi22558 X 5467893 to 5468744 851 CpG island CpG island 22558
Cpgi22559 X 5558151 to 5558307 156 CpG island CpG island 22559
Gm14366 X 5608572 to 5609151 579 - pseudogene predicted gene 14366
Gm14375 X 5665372 to 5666226 854 + pseudogene predicted gene 14375
Btbd35f7 X 5669067 to 5671026 1959 + protein coding gene BTB domain containing 35, family member 7
Gm14373 X 5699730 to 5701872 2142 - pseudogene predicted gene 14373
Gm39489 X 5730162 to 5749677 19515 - lncRNA gene predicted gene, 39489
Tssr5581 X 5824088 to 5824090 2 + TSS region transcription start site region 5581
Gm14452 X 5859765 to 5861537 1772 + pseudogene predicted gene 14452
Gm14451 X 5869686 to 5871458 1772 - pseudogene predicted gene 14451
Gm14448 X 5885743 to 5885952 209 - pseudogene predicted gene 14448