Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:38200990-38641003

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84 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tmem255a X 38196573 to 38252439 55866 - protein coding gene transmembrane protein 255A
Mir3110 X 38210441 to 38210520 79 + miRNA gene microRNA 3110
Tssr163180 X 38224618 to 38224621 3 - TSS region transcription start site region 163180
Gm39507 X 38226965 to 38233654 6689 + lncRNA gene predicted gene, 39507
Tssr163181 X 38252398 to 38252436 38 - TSS region transcription start site region 163181
Cpgi22679 X 38252406 to 38252564 158 CpG island CpG island 22679
Tssr163182 X 38252447 to 38252465 18 - TSS region transcription start site region 163182
Tssr163183 X 38252529 to 38252541 12 - TSS region transcription start site region 163183
Gm17901 X 38285588 to 38286114 526 - pseudogene predicted gene, 17901
Rhox7-ps1 X 38296868 to 38306028 9160 + pseudogene reproductive homeobox 7, pseudogene 1
Tssr160783 X 38316148 to 38316165 17 + TSS region transcription start site region 160783
Tssr160784 X 38316177 to 38316193 16 + TSS region transcription start site region 160784
Atp1b4 X 38316184 to 38336769 20585 + protein coding gene ATPase, (Na+)/K+ transporting, beta 4 polypeptide
Tssr160785 X 38320477 to 38320479 2 + TSS region transcription start site region 160785
Tssr160786 X 38329032 to 38329034 2 + TSS region transcription start site region 160786
Gm40 X 38375287 to 38375895 608 + pseudogene predicted pseudogene 40
Tssr160787 X 38396886 to 38396888 2 + TSS region transcription start site region 160787
Gm4853 X 38396935 to 38397328 393 + pseudogene predicted pseudogene 4853
Lamp2 X 38401357 to 38456454 55097 - protein coding gene lysosomal-associated membrane protein 2
Tssr163184 X 38405490 to 38405527 37 - TSS region transcription start site region 163184
Tssr163185 X 38406659 to 38406679 20 - TSS region transcription start site region 163185
Tssr163186 X 38406705 to 38406727 22 - TSS region transcription start site region 163186
Tssr163187 X 38406732 to 38406767 35 - TSS region transcription start site region 163187
Tssr163188 X 38406799 to 38406812 13 - TSS region transcription start site region 163188
Tssr163189 X 38406841 to 38406862 21 - TSS region transcription start site region 163189
Tssr163190 X 38407534 to 38407604 70 - TSS region transcription start site region 163190
Tssr163191 X 38420389 to 38420403 14 - TSS region transcription start site region 163191
Tssr163192 X 38420892 to 38420911 19 - TSS region transcription start site region 163192
Tssr163193 X 38420990 to 38421003 13 - TSS region transcription start site region 163193
Tssr163194 X 38424297 to 38424308 11 - TSS region transcription start site region 163194
Tssr163195 X 38424341 to 38424360 19 - TSS region transcription start site region 163195
Tssr163196 X 38431017 to 38431049 32 - TSS region transcription start site region 163196
Tssr163197 X 38431978 to 38432058 80 - TSS region transcription start site region 163197
Tssr163198 X 38435164 to 38435179 15 - TSS region transcription start site region 163198
Tssr163199 X 38435427 to 38435450 23 - TSS region transcription start site region 163199
Tssr163200 X 38435471 to 38435486 15 - TSS region transcription start site region 163200
Tssr163201 X 38435542 to 38435560 18 - TSS region transcription start site region 163201
Tssr163202 X 38440168 to 38440200 32 - TSS region transcription start site region 163202
Tssr163203 X 38440217 to 38440237 20 - TSS region transcription start site region 163203
Tssr163204 X 38440272 to 38440301 29 - TSS region transcription start site region 163204
Tssr163205 X 38440307 to 38440318 11 - TSS region transcription start site region 163205
Tssr163206 X 38442052 to 38442073 21 - TSS region transcription start site region 163206
Tssr163207 X 38442082 to 38442110 28 - TSS region transcription start site region 163207
Tssr163208 X 38442122 to 38442143 21 - TSS region transcription start site region 163208
Tssr163209 X 38454808 to 38454810 2 - TSS region transcription start site region 163209
Cpgi22680 X 38456243 to 38456472 229 CpG island CpG island 22680
Tssr163210 X 38456407 to 38456458 51 - TSS region transcription start site region 163210
Gm7598 X 38479543 to 38480835 1292 + lincRNA gene predicted gene 7598
Gm9488 X 38502123 to 38506164 4041 + pseudogene predicted gene 9488
Cul4b X 38533274 to 38576196 42922 - protein coding gene cullin 4B
Tssr163211 X 38564062 to 38564086 24 - TSS region transcription start site region 163211
Tssr163212 X 38564122 to 38564145 23 - TSS region transcription start site region 163212
Tssr163213 X 38564153 to 38564163 10 - TSS region transcription start site region 163213
Tssr163214 X 38564190 to 38564207 17 - TSS region transcription start site region 163214
Tssr163215 X 38564287 to 38564334 47 - TSS region transcription start site region 163215
Tssr163216 X 38564345 to 38564359 14 - TSS region transcription start site region 163216
Cpgi22681 X 38564388 to 38565088 700 CpG island CpG island 22681
Tssr163217 X 38564519 to 38564555 36 - TSS region transcription start site region 163217
Tssr163218 X 38564635 to 38564671 36 - TSS region transcription start site region 163218
Tssr163219 X 38564890 to 38564895 5 - TSS region transcription start site region 163219
Tssr163220 X 38564925 to 38564934 9 - TSS region transcription start site region 163220
Tssr163221 X 38564953 to 38564962 9 - TSS region transcription start site region 163221
Tssr163222 X 38564991 to 38565024 33 - TSS region transcription start site region 163222
Tssr163223 X 38565034 to 38565047 13 - TSS region transcription start site region 163223
Tssr163224 X 38566588 to 38566599 11 - TSS region transcription start site region 163224
Tssr163225 X 38576166 to 38576187 21 - TSS region transcription start site region 163225
Tssr163226 X 38576189 to 38576204 15 - TSS region transcription start site region 163226
Tssr163227 X 38587218 to 38587253 35 - TSS region transcription start site region 163227
Tssr160788 X 38600449 to 38600460 11 + TSS region transcription start site region 160788
Mcts1 X 38600578 to 38613426 12848 + protein coding gene malignant T cell amplified sequence 1
Tssr160789 X 38600590 to 38600597 7 + TSS region transcription start site region 160789
Tssr160790 X 38600626 to 38600691 65 + TSS region transcription start site region 160790
Tssr160791 X 38600858 to 38600888 30 + TSS region transcription start site region 160791
Tssr160792 X 38601209 to 38601274 65 + TSS region transcription start site region 160792
Tssr160793 X 38607318 to 38607321 3 + TSS region transcription start site region 160793
C1galt1c1 X 38630785 to 38635087 4302 - protein coding gene C1GALT1-specific chaperone 1
Cpgi22682 X 38634934 to 38635462 528 CpG island CpG island 22682
Tssr163228 X 38635003 to 38635012 9 - TSS region transcription start site region 163228
Tssr163229 X 38635020 to 38635035 15 - TSS region transcription start site region 163229
Tssr163230 X 38635037 to 38635042 5 - TSS region transcription start site region 163230
Tssr163231 X 38635044 to 38635063 19 - TSS region transcription start site region 163231
Tssr163232 X 38635066 to 38635093 27 - TSS region transcription start site region 163232
Tssr163233 X 38635095 to 38635148 53 - TSS region transcription start site region 163233
Gm18436 X 38636596 to 38637214 618 - pseudogene predicted gene, 18436