Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:37989842-38190074

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Btg1-ps1 X 38013173 to 38018815 5642 - pseudogene B cell translocation gene 1, anti-proliferative, pseudogene 1
Btg1-ps2 X 38038199 to 38043114 4915 - pseudogene B cell translocation gene 1, anti-proliferative, pseudogene 2
Tssr163177 X 38043105 to 38043137 32 - TSS region transcription start site region 163177
Rhox10 X 38066475 to 38071688 5213 + protein coding gene reproductive homeobox 10
Tssr160775 X 38066538 to 38066547 9 + TSS region transcription start site region 160775
Tssr163178 X 38067309 to 38067349 40 - TSS region transcription start site region 163178
Rhox11 X 38076598 to 38085139 8541 - protein coding gene reproductive homeobox 11
Rhox11-ps3 X 38089842 to 38090074 232 + pseudogene reproductive homeobox 11, pseudogene 3
Rhox12 X 38104077 to 38110907 6830 - protein coding gene reproductive homeobox 12
Tssr163179 X 38110913 to 38110920 7 - TSS region transcription start site region 163179
Cpgi22676 X 38121086 to 38121901 815 CpG island CpG island 22676
Tssr160776 X 38121174 to 38121189 15 + TSS region transcription start site region 160776
Rhox13 X 38121219 to 38129967 8748 + protein coding gene reproductive homeobox 13
Gm39506 X 38121869 to 38158422 36553 - lncRNA gene predicted gene, 39506
Tssr160777 X 38179884 to 38179891 7 + TSS region transcription start site region 160777
Tssr160778 X 38180597 to 38180613 16 + TSS region transcription start site region 160778
Zfp36l1-ps X 38180728 to 38181626 898 + pseudogene zinc finger protein 36, C3H type-like 1, pseudogene
Cpgi22677 X 38181030 to 38181307 277 CpG island CpG island 22677
Cpgi22678 X 38189506 to 38190430 924 CpG island CpG island 22678
Tssr160779 X 38189732 to 38189750 18 + TSS region transcription start site region 160779
Tssr160780 X 38189780 to 38189826 46 + TSS region transcription start site region 160780
Zbtb33 X 38189793 to 38197046 7253 + protein coding gene zinc finger and BTB domain containing 33
Tssr160781 X 38189829 to 38189842 13 + TSS region transcription start site region 160781
Tssr160782 X 38189850 to 38189865 15 + TSS region transcription start site region 160782