Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:37668562-38088565

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rhox3h X 37657688 to 37668764 11076 - protein coding gene reproductive homeobox 3H
Rhox2h X 37668997 to 37673277 4280 - protein coding gene reproductive homeobox 2H
Rhox7-ps2 X 37676370 to 37679547 3177 - pseudogene reproductive homeobox 7, pseudogene 2
Rhox2-ps X 37682921 to 37683431 510 - pseudogene reproductive homeobox 2, pseudogene
Tssr5611 X 37753936 to 37753937 1 + TSS region transcription start site region 5611
Tssr5612 X 37754591 to 37754633 42 + TSS region transcription start site region 5612
Tssr5613 X 37804760 to 37804778 18 + TSS region transcription start site region 5613
Rhox5 X 37804842 to 37808876 4034 + protein coding gene reproductive homeobox 5
Tssr5614 X 37805217 to 37805232 15 - TSS region transcription start site region 5614
Gm34522 X 37816375 to 37817607 1232 - lncRNA gene predicted gene, 34522
Tssr160770 X 37826955 to 37826962 7 + TSS region transcription start site region 160770
Tssr160771 X 37827007 to 37827010 3 + TSS region transcription start site region 160771
Tssr160772 X 37827013 to 37827019 6 + TSS region transcription start site region 160772
Tssr160773 X 37827044 to 37827047 3 + TSS region transcription start site region 160773
Rhox6 X 37827055 to 37829857 2802 + protein coding gene reproductive homeobox 6
Tssr160774 X 37827361 to 37827425 64 + TSS region transcription start site region 160774
Rhox7a X 37831686 to 37841171 9485 + protein coding gene reproductive homeobox 7A
Rhox8 X 37874778 to 37878944 4166 - protein coding gene reproductive homeobox 8
Tssr163165 X 37878486 to 37878498 12 - TSS region transcription start site region 163165
Tssr163166 X 37878507 to 37878512 5 - TSS region transcription start site region 163166
Tssr163167 X 37878521 to 37878533 12 - TSS region transcription start site region 163167
Tssr163168 X 37878562 to 37878565 3 - TSS region transcription start site region 163168
Tssr163169 X 37878586 to 37878602 16 - TSS region transcription start site region 163169
Tssr163170 X 37878815 to 37878820 5 - TSS region transcription start site region 163170
Tssr163171 X 37878827 to 37878848 21 - TSS region transcription start site region 163171
Tssr163172 X 37879033 to 37879037 4 - TSS region transcription start site region 163172
Rhox7b X 37886547 to 37897232 10685 - protein coding gene reproductive homeobox 7B
Rhox9 X 37899097 to 37901770 2673 - protein coding gene reproductive homeobox 9
Tssr163173 X 37901350 to 37901365 15 - TSS region transcription start site region 163173
Tssr163174 X 37901367 to 37901379 12 - TSS region transcription start site region 163174
Tssr163175 X 37901383 to 37901410 27 - TSS region transcription start site region 163175
Rhox11-ps1 X 37932474 to 37933483 1009 - pseudogene reproductive homeobox 11, pseudogene 1
Rhox11-ps2 X 37940816 to 37945602 4786 - pseudogene reproductive homeobox 11, pseudogene 2
Tssr163176 X 37945654 to 37945675 21 - TSS region transcription start site region 163176
Btg1-ps1 X 38013173 to 38018815 5642 - pseudogene B cell translocation gene 1, anti-proliferative, pseudogene 1
Btg1-ps2 X 38038199 to 38043114 4915 - pseudogene B cell translocation gene 1, anti-proliferative, pseudogene 2
Tssr163177 X 38043105 to 38043137 32 - TSS region transcription start site region 163177
Rhox10 X 38066475 to 38071688 5213 + protein coding gene reproductive homeobox 10
Tssr160775 X 38066538 to 38066547 9 + TSS region transcription start site region 160775
Tssr163178 X 38067309 to 38067349 40 - TSS region transcription start site region 163178
Rhox11 X 38076598 to 38085139 8541 - protein coding gene reproductive homeobox 11